BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08049 (UTR included)
(2944 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058A2B01 1449 0.0
>BF01058A2B01
Length = 788
Score = 1449 bits (731), Expect = 0.0
Identities = 749/755 (99%)
Strand = Plus / Plus
Query: 679 aaaataaaaaagaaatagatgttccagcagtaaatattgatggatcaaatttattctcag 738
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 aaaataaaaaagaaatagatgttccagaagtaaatattgatggatcaaatttattctcaa 60
Query: 739 ctggtgagaacagcttagagacgaatcaagcaacatccacacctaacaccacaagtaaaa 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggtgagaacagcttagagacgaatcaagcaacatccacacctaacaccacaagtaaaa 120
Query: 799 aagataaaacttgtaaaatgaaatcaatcatgaagaattctatggcagaggaaagtctga 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagataaaacttgtaaaatgaaatcaatcatgaagaattctatggcagaggaaagtctga 180
Query: 859 atgtatcggacgttcaagcagcgagcaccaagcctaaaaaaaggaataaatcagtaagtt 918
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtatcggacgttcaagcagcaagcaccaagcctaaaaaaaggaataaatcagtaagtt 240
Query: 919 tcatgcttgacgaaaatgaagaggtgattatcaaaaaatcaaaatcggaagaatcgatga 978
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 241 tcatgcttgacgaaaatgaagaggtgattatcaaaaaatcaaaatcagaagagtcgatga 300
Query: 979 cagtcaaaaaatcacacaccgacaaaattaataagaagtccaaaaaaaataaatcttctg 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagtcaaaaaatcacacaccgacaaaattaataagaagtccaaaaaaaataaatcttctg 360
Query: 1039 atcataaaaaaccaaatgacaaagaaaacgagtctgatgttagcaatatgaatattgata 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcataaaaaaccaaatgacaaagaaaacgagtctgatgttagcaatatgaatattgata 420
Query: 1099 cagaccaggcaggaagaccttccaagaaacaattaaaatctaaatctaagactgaaaaga 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagaccaggcaggaagaccttccaagaaacaattaaaatctaaatctaagactgaaaaga 480
Query: 1159 tggaactcgaaaatacatctaaggctgaaattgtagaggacgatcctagtgttgacagtc 1218
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 481 tggaactcgaaaatacatctaaggctgaaattgtagaggacgaccctagtgttgacagtc 540
Query: 1219 aaacattaaataaatctgaaaagaaattacggaaaaagaagaaagttataccgagtgagg 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaacattaaataaatctgaaaagaaattacggaaaaagaagaaagttataccgagtgagg 600
Query: 1279 ttcatgacgaaaccagctctggaaccgttgaagatacaatgaatgtagatactgaaaaca 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcatgacgaaaccagctctggaaccgttgaagatacaatgaatgtagatactgaaaaca 660
Query: 1339 agaatgaagataaaatagtgaaattaaagaagaaaaaacatccatctaaatcatcacagg 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agaatgaagataaaatagtgaaattaaagaagaaaaaacatccatctaaatcatcacagg 720
Query: 1399 tgacagagactgacggggaacctgtaacaaagtca 1433
|||||||||||||||||||||||||||||||||||
Sbjct: 721 tgacagagactgacggggaacctgtaacaaagtca 755
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 398,679
Number of extensions: 8361
Number of successful extensions: 8361
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8361
Number of HSP's successfully gapped: 1
Length of query: 2944
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2926
Effective length of database: 8,109,745
Effective search space: 23729113870
Effective search space used: 23729113870
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)