BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08053 (UTR included)
(1564 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3343_C1 1513 0.0
>BF14_3343_C1
Length = 841
Score = 1513 bits (763), Expect = 0.0
Identities = 805/818 (98%), Gaps = 2/818 (0%)
Strand = Plus / Plus
Query: 385 taataaaacaacaattgtgttctaaatacaaaattaaataaattttatgtcttcatttta 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taataaaacaacaattgtgttctaaatacaaaattaaataaattttatgtcttcatttta 60
Query: 445 gttgaaagcatccaactactttatatatactttgtttttttttataattatacgatatgg 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgaaagcatccaactactttatatatactttgtttttttttataattatacgatatgg 120
Query: 505 atcccatagctgttttacaaagcagaattgaacaacttgaagctaaattaggaataaatg 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcccatagctgttttacaaagcagaattgaacaacttgaagctaaattaggaataaatg 180
Query: 565 cttgtaatattatagaaggacagcaaggagactcggctactgcaaatttgttaaacaccg 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttgtaatattatagaaggacagcaaggagactcggctactgcaaatttgttaaacaccg 240
Query: 625 cccaggctattaacaatgctacagcagaacacgaaaagcttaaagaagccaggaatatgg 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccaggctattaacaatgctacagcagaacacgaaaagcttaaagaagccaggaatatgg 300
Query: 685 ctaatgaactcaacaactatactgatccaaatttagctgaaaatttgcaacaaaataata 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctaatgaactcaacaactatactgatccaaatttagctgaaaatttgcaacaaaataata 360
Query: 745 tgcacatgcatgaagtagttgcagccgagcctgtaatacaacatcattgtcactgtatgc 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcacatgcatgaagtagttgcagccgagcctgtaatacaacatcattgtcactgtatgc 420
Query: 805 atcactgtaaacaggcagcacctgttttagaatctgagcccatacagcaagttcctgtga 864
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcactgtaaacaggcagcaccagttttagaatctgagcccatacagcaagttcctgtga 480
Query: 865 tgcaagaaacagtgaataaaatgcatttagcagcagcagaagtaaaggcagaagcagatt 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcaagaaacagtgaataaaatgcatttagcagcagcagaagtaaaggcagaagcagatt 540
Query: 925 ctgtatctcaaggtattcaagaattggcagaaacttgtggaacggcagcttcaaagacct 984
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 541 ctgtatctcaaggtattcaagaattggcagaaacttgcggaacggcagcctcaaagacct 600
Query: 985 ctgaacaactagcggccgtagctcagaaagttaatgaagttgagcagtcatttccccggc 1044
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgaacaactagcggctgtagctcagaaagttaatgaagttgagcagtcatttccccggc 660
Query: 1045 gcagaaatggcttagactaatgtcatcttggatataaacacttttgttatcctgctataa 1104
|||||||||||||||||||| ||||||||| ||| |||||| ||||| |||||||||||
Sbjct: 661 gcagaaatggcttagactaaagtcatcttgaataaaaacac--ttgttttcctgctataa 718
Query: 1105 aattactttgtactatttattaaaaatcaaaaagtggcaattgagcacaacagtaatgct 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aattactttgtactatttattaaaaatcaaaaagtggcaattgagcacaacagtaatgct 778
Query: 1165 tgcatatttatttgtctgaatataataaaggagcattt 1202
|| ||||||||||||||||||||| ||||| |||||||
Sbjct: 779 tgaatatttatttgtctgaatatagtaaagaagcattt 816
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 265,092
Number of extensions: 6696
Number of successful extensions: 6696
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6695
Number of HSP's successfully gapped: 1
Length of query: 1564
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1547
Effective length of database: 8,119,229
Effective search space: 12560447263
Effective search space used: 12560447263
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)