BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08054 (UTR included)
(2416 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3204_C1 1800 0.0
>BF14_3204_C1
Length = 950
Score = 1800 bits (908), Expect = 0.0
Identities = 929/936 (99%)
Strand = Plus / Plus
Query: 772 acgccgacagtcaggacaacggggacaccgactctgatgatagtgatgacgtcaaagtaa 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgccgacagtcaggacaacggggacaccgactctgatgatagtgatgacgtcaaagtaa 60
Query: 832 cgattggagaaattaagtcaggaccacaagcttatgccagtttgaatataaaacgtggtg 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgattggagaaattaagtcaggaccacaagcttatgccagtttgaatataaaacgtggtg 120
Query: 892 ttggacttgtagcagctggaactgagaagcctcgtcaaggtccagcggccggtaacaaag 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttggacttgtagcagctggaactgagaagcctcgtcaaggtccagcggccggtaacaaag 180
Query: 952 tgactcttgaagacttagatggtcccggaagcatcaacggcgtgccagcgctagagttta 1011
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 tgactcttgaagacttagatggtccaggaagcatcaacggcgtgccagcgctagagttta 240
Query: 1012 atattgacactattgaagataaaccctggaacaaacctggagctgacatatctgattact 1071
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 atattgacactattgaagataaaccctggaacaaacctggagctgatatatctgattact 300
Query: 1072 tcaattacggtttcaacgaggtgacctggagcgcttactgtgagcgtcagagacggatgc 1131
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaattacggtttcaacgaggtgacttggagcgcttactgtgagcgtcagagacggatgc 360
Query: 1132 gtgttagtgaggccggtgtcgctctacacgccgccccgccgccccgcgccgcccccacag 1191
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcgttagtgaggccggtgtcgctctacacgccgccccgccgccccgcgccgcccccacag 420
Query: 1192 acagacggcaacaaggtccaccaagacatgacgacatgccgccagggatgccaaataatt 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acagacggcaacaaggtccaccaagacatgacgacatgccgccagggatgccaaataatt 480
Query: 1252 accagtccagagagaacactatacaggtgatgacagccgagcgtcgtgagtacggccgcg 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accagtccagagagaacactatacaggtgatgacagccgagcgtcgtgagtacggccgcg 540
Query: 1312 gtcaggtgcgcgaggctgcaccacccgccgactacttcagcgctccgccccccgaccact 1371
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcaggtgcgcgaggctgcgccacccgccgactacttcagcgctccgccccccgaccact 600
Query: 1372 actaccagcctccgcctcacgcgcctcacgctccacacctccctccacaccagcacacac 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actaccagcctccgcctcacgcgcctcacgctccacacctccctccacaccagcacacac 660
Query: 1432 cacactcatacgaagaaccctgggctcatccagaacagacaggctgggcgccgtcagata 1491
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cacactcatacgaggaaccctgggctcatccagaacagacaggctgggcgccgtcagata 720
Query: 1492 taaaggaactaacgcccggacccatgggaccgccgatgccgctaggcatgccccccgtac 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taaaggaactaacgcccggacccatgggaccgccgatgccgctaggcatgccccccgtac 780
Query: 1552 acatgcccgcgccctacccgacataccgctcgcacgtcacacacacacacgaaagagacc 1611
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 acatgccagcgccctacccgacataccgctcgcacgtcacacacacacacgaaagagacc 840
Query: 1612 gggaccgggaacgggaaagagaccgagaccgggaccgggaccgggacaggacccgcgacg 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gggaccgggaacgggaaagagaccgagaccgggaccgggaccgggacaggacccgcgacg 900
Query: 1672 accgtgaccgacgggaccgggaccggagggatgagg 1707
||||||||||||||||||||||||||||||||||||
Sbjct: 901 accgtgaccgacgggaccgggaccggagggatgagg 936
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 267,563
Number of extensions: 5185
Number of successful extensions: 5185
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5169
Number of HSP's successfully gapped: 1
Length of query: 2416
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2399
Effective length of database: 8,119,229
Effective search space: 19478030371
Effective search space used: 19478030371
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)