BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08063 (UTR included)
(1480 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1E11 113 8e-25
BF14_1645_C1 100 1e-20
BF14_2430_C1 94 8e-19
BF14_1695_C1 84 7e-16
>BF01025B1E11
Length = 786
Score = 113 bits (57), Expect = 8e-25
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 1388 atggccttcattcgtgcaaagacgtccacaatgtattctgccagtttcgtgtagaatgga 1447
||||||||||| ||||||| ||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 264 atggccttcatccgtgcaaggacgtgcacaatatattctgccagtatcgtgtagaatgga 205
Query: 1448 ggagacacgatacgggattgacctttgaatgaa 1480
||| ||||||| ||||||| || ||||||||||
Sbjct: 204 ggaaacacgatccgggattaacttttgaatgaa 172
>BF14_1645_C1
Length = 793
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 1376 tttttttataacatggccttcattcgtgcaaagacgtccacaatgtattctgccagtttc 1435
|||||||||| |||||||||| ||||| ||||||| |||| | |||||||||||| ||
Sbjct: 190 tttttttatattatggccttcacccgtgccaagacgtgcacagtatattctgccagtgtc 131
Query: 1436 gtgtagaatggaggagacacgatacgggattgacctttgaat 1477
|||||||||||||||| |||||| ||||||| || |||||||
Sbjct: 130 gtgtagaatggaggaggcacgatccgggattaacttttgaat 89
>BF14_2430_C1
Length = 830
Score = 93.7 bits (47), Expect = 8e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 1388 atggccttcattcgtgcaaagacgtccacaatgtattctgccagtttcgtgtagaatgga 1447
||||||||||| |||||||||| || |||| | |||||||||||| ||||||||||||||
Sbjct: 228 atggccttcatacgtgcaaagatgtgcacagtatattctgccagtgtcgtgtagaatgga 169
Query: 1448 ggagacacgatacgggatt 1466
||| ||||||| |||||||
Sbjct: 168 ggaaacacgatccgggatt 150
>BF14_1695_C1
Length = 1407
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 1373 atttttttttataacatggccttcattcgtgcaaagacgtccacaatgtattctgccagt 1432
|||||||||||||| ||||| ||||| ||||||||||||| |||| | ||||||||||||
Sbjct: 1250 atttttttttataatatggcattcatccgtgcaaagacgtgcacagtatattctgccagt 1191
Query: 1433 ttcgtgtagaatggagga 1450
|| ||||||||| ||||
Sbjct: 1190 gtcatgtagaatgaagga 1173
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 275,072
Number of extensions: 6876
Number of successful extensions: 6876
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6876
Number of HSP's successfully gapped: 4
Length of query: 1480
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1463
Effective length of database: 8,119,229
Effective search space: 11878432027
Effective search space used: 11878432027
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)