BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08084 (UTR included)
(3541 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038A2B03 220 1e-56
>BF01038A2B03
Length = 827
Score = 220 bits (111), Expect = 1e-56
Identities = 123/126 (97%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 3418 tgtcatcggattaggtgctatcgttatgtttttgtgagacgtatagcgagaatcccttag 3477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtcatcggattaggtgctatcgttatgtttttgtgagacgtatagcgagaatcccttat 60
Query: 3478 gaaactggccg--tttttttttataattataaacaatatatgaatattacttgaatatga 3535
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaactggccgtttttttttttataattataaacaatatatgaatattacttgaatatga 120
Query: 3536 gcttgc 3541
||||||
Sbjct: 121 gcttgc 126
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 349,823
Number of extensions: 20792
Number of successful extensions: 20792
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20791
Number of HSP's successfully gapped: 1
Length of query: 3541
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3523
Effective length of database: 8,109,745
Effective search space: 28570631635
Effective search space used: 28570631635
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)