BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08089 (UTR included)
(4141 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3337_C1 1602 0.0
>BF14_3337_C1
Length = 852
Score = 1602 bits (808), Expect = 0.0
Identities = 842/852 (98%), Gaps = 4/852 (0%)
Strand = Plus / Plus
Query: 3215 cagttttcagtttacaacaagtcctatttatgaaaacgacgtacccagtatttatggtag 3274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagttttcagtttacaacaagtcctatttatgaaaacgacgtacccagtatttatggtag 60
Query: 3275 tgaaactctttcaccagctcgaggttctgtccatcacgtaattttatataaggacgcaat 3334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaaactctttcaccagctcgaggttctgtccatcacgtaattttatataaggacgcaat 120
Query: 3335 ttatgatgactatggattctctgtatccgatgggttgtatgaaagaggagtgtatattaa 3394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttatgatgactatggattctctgtatccgatgggttgtatgaaagaggagtgtatattaa 180
Query: 3395 tcgtataaggaagggagggccggctgatatagtagggctgttgagaccctacgacagaat 3454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgtataaggaagggagggccggctgatatagtagggctgttgagaccctacgacagaat 240
Query: 3455 tttacaggtgaacggcacaagaactgtggactacgactgctgtcttacagtgcctttgat 3514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttacaggtgaacggcacaagaactgtggactacgactgctgtcttacagtgcctttgat 300
Query: 3515 agcagcagccggagataggctggaaattgttgtccaaaggaatgttacatctagagatct 3574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcagcagccggagataggctggaaattgttgtccaaaggaatgttacatctagagatct 360
Query: 3575 caaaaaccagagacatgaagacagttcaagccctagtgaaagtagtatcgtgactaagac 3634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaaaaccagagacatgaagacagttcaagccctagtgaaagtagtatcgtgactaagac 420
Query: 3635 catatagtgcataacccgcctttagtgaaaagacacaaaaaagtgctaaaggttacgtta 3694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catatagtgcataacccgcctttagtgaaaagacacaaaaaagtgctaaaggttacgtta 480
Query: 3695 catttgtcattttatattataagtactttcaaatgtctacgcattttgaattatagtgaa 3754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 catttgtcattttatattataagtactttcaaatgtctacgcattttgaattatagtgaa 540
Query: 3755 agt---atacttacaagcgaaaaaactctatgatttgcacaaatacataacataggccaa 3811
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 541 agtaagatacttacaagcgaaaaaactctatgatttgcaaaaatacataacataggccaa 600
Query: 3812 tggatatgccaaagatattgtatacaactgtatacatttgaagtgacggggaagaaaata 3871
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggatacgccaaagatattgtatacaactgtatacatttgaagtgacggggaagaaaata 660
Query: 3872 gcgcttagtctcaaagtttttagaaaaggtaataaacatggactaatatgatgaaatata 3931
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 661 gcgcttagtctaaaagtttttagaaaaggtaataaacatggactagtatgatgaaatata 720
Query: 3932 tctgtaatattatgtaaagaactctcaaaatcaatttattgaaaatcgacacgttcagtt 3991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tctgtaatattatgtaaagaactctcaaaatcaatttattgaaaatcgacacgttcagtt 780
Query: 3992 gggagattcggatattctaacctcttccttgaacatcccatttt-cctttatccgttcct 4050
||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 781 gggagattcggnnattctaacctcttccttgaacatcccattttccctttatccgttcct 840
Query: 4051 atactcacctgt 4062
||||||||||||
Sbjct: 841 atactcacctgt 852
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 447,087
Number of extensions: 17873
Number of successful extensions: 17873
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 17871
Number of HSP's successfully gapped: 1
Length of query: 4141
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4123
Effective length of database: 8,109,745
Effective search space: 33436478635
Effective search space used: 33436478635
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)