BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08100 (UTR included)
(2284 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046B1F08 1340 0.0
>BF01046B1F08
Length = 801
Score = 1340 bits (676), Expect = 0.0
Identities = 697/704 (99%)
Strand = Plus / Plus
Query: 388 atagacgtgggtgtgaaacatggaatagatgtttcatgattgattgacatcagagcaata 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atagacgtgggtgtgaaacatggaatagatgtttcatgattgattgacatcagagcaata 157
Query: 448 gtaacatgatactgtctgctaagtgatgaacaaaggtgaattctccgttcacaatgatcg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gtaacatgatactgtctgctaagtgatgaacaaaggtgaattctccgttcacaatgatcg 217
Query: 508 cgggcgttgacacacagaatgtattcaatgctagtaatatcggatcaaatgacactttca 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cgggcgttgacacacagaatgtattcaatgctagtaatatcggatcaaatgacactttca 277
Query: 568 actttttcgacgacgccaggctggtgtcgcttatcaaacacagaggcaccaaccaaagca 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 actttttcgacgacgccaggctggtgtcgcttatcaaacacagaggcaccaaccaaagca 337
Query: 628 ctaacattggcgactggttgagagcgttagaagatcttcggaacaaatataacatatcac 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctaacattggcgactggttgagagcgttagaagatcttcggaacaaatataacatatcac 397
Query: 688 tcgtaaaggaatgcgatcgttctgattactgttccggcgaatttagagatttaattctcg 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tcgtaaaggaatgcgatcgttctgattactgttccggcgaatttagagatttaattctcg 457
Query: 748 cttacaacagtattcacggatatattagtctattaatatgtttatttggaagtctcgcca 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cttacaacagtattcacggatatattagtctattaatatgtttatttggaagtctcgcca 517
Query: 808 atgcattgaacgtggttgttctgacgaggcgggacctcgctgctgctcctatcaaccgtc 867
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 518 atgcattgaacgtggttgttttgacgaggcgggacctcgctgctgctcctatcaaccgtc 577
Query: 868 ttctgaagtggctcgctgtagctgatgtgttcgtcatgatggagtatgtgccgtttgctg 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttctgaagtggctcgctgtagctgatgtgttcgtcatgatggagtatgtgccgtttgctg 637
Query: 928 tttacagatacctgctgtttcccggccaagaagagcgcccatactcgtgggctgtctaca 987
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 638 tttacagatacctgctgtttcccggccaagaagagcgcccgtactcgtgggctgtctaca 697
Query: 988 tgctgttccacatgcacttcactcagattttacatacagcatcaatactattgacgttgt 1047
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 698 tgctgttccacatgcacttcacacagattttacatacagcatcaatactattgacgttat 757
Query: 1048 cactcgcaatttggcgatacattgctatcaaatacccatctcac 1091
|||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 758 cactcgcaatctggcgatatattgcgatcaaatacccatctcac 801
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 281,850
Number of extensions: 5825
Number of successful extensions: 5825
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5825
Number of HSP's successfully gapped: 1
Length of query: 2284
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2267
Effective length of database: 8,119,229
Effective search space: 18406292143
Effective search space used: 18406292143
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)