BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08101 (UTR included)
(1456 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013B1E04 813 0.0
>BF01013B1E04
Length = 772
Score = 813 bits (410), Expect = 0.0
Identities = 419/422 (99%)
Strand = Plus / Plus
Query: 446 cagtgtgtgatttgacataaaacaagtgaatccagtctcaccttgtaaagagaaaatggg 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 cagtgtgtgatttgacataaaacaagtgaatccagtctcaccttgtaaagagaaaatggg 109
Query: 506 gaactgttttagtagacccggagaaaaggattctaaaacaaaaaatgaaagggttaatcc 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gaactgttttagtagacccggagaaaaggattctaaaacaaaaaatgaaagggttaatcc 169
Query: 566 tcatgaagaagaccctagacagtttcaaactcctgttcctacaccacccccagatccaat 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tcatgaagaagaccctagacagtttcaaactcctgttcctacaccacccccagatccaat 229
Query: 626 aagatctactgtaaatcaaggcccagataccagtgaggtccctcccacccgaatatttgt 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aagatctactgtaaatcaaggcccagataccagtgaggtccctcccacccgaatatttgt 289
Query: 686 tgccctttatgactacgatgcaaggaccgatgaggaccttagttttaggaaaggagaaca 745
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tgccctgtatgactacgatgcaaggaccgatgaggaccttagttttaggaaaggagaaca 349
Query: 746 tttggagatactcaatgatacacagggtgactggtggttagcaagaagtaagaagacaaa 805
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tttggaaatactcaatgatacacagggtgactggtggttagcaagaagtaagaagacaaa 409
Query: 806 acaagaaggctacattccatcgaattatgtcgctcgcttgcaatctatagaggccgaacc 865
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 acaagaagggtacattccatcgaattatgtcgctcgcttgcaatctatagaggccgaacc 469
Query: 866 at 867
||
Sbjct: 470 at 471
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 317 gtccgatcggggttttatgttctttgtttactataaaattatgtttctc 365
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtccgatcgtggttttatgttctttgtttactataaaattatgtttctc 49
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,175
Number of extensions: 5938
Number of successful extensions: 5938
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5938
Number of HSP's successfully gapped: 2
Length of query: 1456
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1439
Effective length of database: 8,119,229
Effective search space: 11683570531
Effective search space used: 11683570531
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)