BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08104 (UTR included)
(1297 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2204_C1 1564 0.0
>BF14_2204_C1
Length = 849
Score = 1564 bits (789), Expect = 0.0
Identities = 819/831 (98%)
Strand = Plus / Plus
Query: 444 cagcggtcgatatttagcaaaaattgttcgtaagtcttcctaaaacaaacgaacaaaatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cagcggtcgatatttagcaaaaattgttcgtaagtcttcctaaaacaaacgaacaaaatg 61
Query: 504 gcttgcaaattctgcggtcctaaactatctttatgtgggctcgtcttgagtgtatgggga 563
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 62 gcttgcaaattctgcggtcctaaactatctttatgtgggctcgtcttgagtgtgtgggga 121
Query: 564 attattcaattgaccttgatgggcgttttctactatatacgagctgtagctctgcttgaa 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 attattcaattgaccttgatgggcgttttctactatatacgagctgtagctctgcttgaa 181
Query: 624 gacattcctctcggtgagaaacacggcagcatcgaagaatttgtagctgaagtagaacat 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gacattcctctcggtgagaaacacggcagcatcgaagaatttgtagctgaagtagaacat 241
Query: 684 ggatataatcagaacgcccttaattgctggatcgccgccttactctatgtgattacattg 743
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 242 ggatataatcagaacgccctcaattgctggatcgccgccttactctatgtgatcacatta 301
Query: 744 gtaatttctggtcaccagttctggatgaataatcgctcatcagttagcatgtaatatgta 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtaatttctggtcaccagttctggatgaataatcgctcatcagttagcatgtaatatgta 361
Query: 804 ctttataggtgcacacactaccttttgttaatatctccattccaattactttggccagaa 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctttataggtgcacacactaccttttgttaatatctccattccaattactttggccagaa 421
Query: 864 aaattgtatattcagcattaaaaatacatgctttgccagattcacatagtaaatgttaat 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaattgtatattcagcattaaaaatacatgctttgccagattcacatagtaaatgttaat 481
Query: 924 atattaaattatttcattatatgcaatttttctagacaatttaatctgtattatagaaga 983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atattaaattatttcattatatgcaatttttctagacaatttaatctgtattatagaaga 541
Query: 984 aaaaaaatatttattacaactcctgaacttgctcttattgtccccaattgtttttccaga 1043
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 542 aaaaaaatatttattacaactcctaaacttgctcttaatgtccccaattgtttttccaga 601
Query: 1044 aagtaatgtagtgctattattgcatttgaaggtcaagataccattaaaaccttaagaata 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aagtaatgtagtgctattattgcatttgaaggtcaagataccattaaaaccttaagaata 661
Query: 1104 gcagaagttctattcctattataccaatgttataaaacaaaacatctctgttaaaaagta 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gcagaagttctattcctattataccaatgttataaaacaaaacatctctgttaaaaagta 721
Query: 1164 ttatgttgatgaatatttgttcagtataaattgtacataaaatatagttctgtaggtaca 1223
|||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct: 722 ttatgttgatgaatatttgttcagtataaattgtacatnnantatagttctgtnnntaca 781
Query: 1224 ttgtaatatgattctatagttttttcttgaattaaataataatgttacaaa 1274
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttgtaatatgattctatagttttttcttgaattaaataataatgttacaaa 832
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,764
Number of extensions: 5044
Number of successful extensions: 5044
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5044
Number of HSP's successfully gapped: 1
Length of query: 1297
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1280
Effective length of database: 8,119,229
Effective search space: 10392613120
Effective search space used: 10392613120
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)