BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08115 (UTR included)
(2239 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01035X1E12 1473 0.0
>BF01035X1E12
Length = 823
Score = 1473 bits (743), Expect = 0.0
Identities = 803/826 (97%), Gaps = 19/826 (2%)
Strand = Plus / Plus
Query: 249 tttcactgaaaattgagtagtgtttgcttgattgtatatttaaagggtagtgtaagtgta 308
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 tttcactgaaaattgagtagtgttt---tgattgtatatttaaagggtagtgtaagtgta 57
Query: 309 gttaacctaagaaaattaaaacaagtcgttttaattgttattttaaagacttatacgcaa 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gttaacctaagaaaattaaaacaagtcgttttaattgttattttaaagacttatacgcaa 117
Query: 369 ttttcaaataatactctaacctatacggtgtttgtttactattagtgaaaaatttaaaat 428
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ttttcaaacaatactctaacctatacggtgtttgtttactattagtgaaaaatttaaaat 177
Query: 429 aagattaaatattgtgaaacattgcaatactattacgtatgtttttaaaatcctgtattt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 aagattaaatattgtgaaacattgcaatactattacgtatgtttttaaaatcctgtattt 237
Query: 489 taaaataccacgatgtatagcttaagattattgactaagcacatcaaccggtctctaata 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 taaaataccacgatgtatagcttaagattattgactaagcacatcaaccggtctctaata 297
Query: 549 cataaaagattcattacaaataacaaaccaaagttagtacaagtaccgaggtattactgt 608
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cataaaagtttcattacaaataacaaaccaaagttagtacaagtaccgaggtattactgt 357
Query: 609 actcaaaataatcctgattatcaactagat----------------gatattgtaaatga 652
|||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 358 actcaaaataatcctgattatcaactagatttattttctttcagatgatattgtaaatga 417
Query: 653 tatatgtaaaggagatgcagaactagaaaaaagattgagagttttgacacttgaggtaga 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tatatgtaaaggagatgcagaactagaaaaaagattgagagttttgacacttgaggtaga 477
Query: 713 agtaatgagacaggatggtcgctgtgcaccagattatcttaaattggatcactggaagca 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agtaatgagacaggatggtcgctgtgcaccagattatcttaaattggatcactggaagca 537
Query: 773 cttgctggatttgcctagtagaaatcagagatctaattatttgacatttctctggaaaac 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cttgctggatttgcctagtagaaatcagagatctaattatttgacatttctctggaaaac 597
Query: 833 cgaaaagaaaagagaaaatcagaaaagaaagaaggaggagaggagaatcgaacttgagaa 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cgaaaagaaaagagaaaatcagaaaagaaagaaggaggagaggagaatcgaacttgagaa 657
Query: 893 ctcaccacaagaagaagagaaagagtatccagatgatttgctctatggaattaaacatca 952
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 658 ctcaccacaagaagaagagaaagagtatccagatgatttactctatggaattaaacatca 717
Query: 953 atctttattcctacgtattcgagaccaatctattaattattttgataattatcgggctct 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 atctttattcctacgtattcgagaccaatctattaattattttgataattatcgggctct 777
Query: 1013 gctagctatgatacatggtcaatcagttgtcattgattgttcttat 1058
| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 gttagctatgatacatggtcaatcagttgtcattgattgttcttat 823
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 390,091
Number of extensions: 10020
Number of successful extensions: 10020
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10019
Number of HSP's successfully gapped: 2
Length of query: 2239
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2222
Effective length of database: 8,119,229
Effective search space: 18040926838
Effective search space used: 18040926838
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)