BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08116 (UTR included)
(2338 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2080_C1 2254 0.0
>BF14_2080_C1
Length = 1157
Score = 2254 bits (1137), Expect = 0.0
Identities = 1152/1157 (99%)
Strand = Plus / Plus
Query: 429 gtggagttgtcgacttgttaaatagattattggttatattttctatgtaaacgaaaagaa 488
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggacttgtcgacttgttaaatagattattggttatattttctatgtaaacgaaaagaa 60
Query: 489 actactacaaaaatgagttactctaagtttgaccttacgtttaaaattgggcagtatttg 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actactacaaaaatgagttactctaagtttgaccttacgtttaaaattgggcagtatttg 120
Query: 549 gatcgacatttagtctttccattactagaattcttagccgctaaagagacatatgaccaa 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatcgacatttagtctttccattactagaattcttagccgctaaagagacatatgaccaa 180
Query: 609 tccgaacttttacaagcaaagttagagattttaagcaaaaccaacatgatcgattatgtg 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccgaacttttacaagcaaagttagagattttaagcaaaaccaacatgatcgattatgtg 240
Query: 669 attgaaataagaagtatgctttatcccgatgatgacacaccagaggaaattaaatctaga 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgaaataagaagtatgctttatcccgatgatgacacaccagaggaaattaaatctaga 300
Query: 729 agaggagtagtattattgcaactccaagagctccaagatgctgtggaaccagttttaaaa 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaggagtagtattattgcaactccaagagctccaagatgctgtggaaccagttttaaaa 360
Query: 789 ctgatgcagagagatgatgttatgaagactgttgaaaccatgagggatcccaaaactctt 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgatgcagagagatgatgttatgaagactgttgaaaccatgagggatcccaaaactctt 420
Query: 849 ataaactacctaactaccaataaggaatttgatttcaaaatagagatgatagacagcatg 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ataaactacctaactaccaataaggaatttgatttcaaaatagagatgatagacagcatg 480
Query: 909 tatcgtctagctaaataccggtatgagtgtggtaattatgtggaatcggcatcataccta 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tatcgtctagctaaataccggtatgagtgtggtaattatgtggaatcggcatcataccta 540
Query: 969 tacttctgtcagctggttctatcacccactgataagaattatctatcagtactctggggt 1028
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 tacttctgtcagctggttctatcacccactgataagaattatctatcggtactctggggt 600
Query: 1029 aagttagccagtgagattctggtccagaactgggatggtgctctagatgatttgaccaag 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagttagccagtgagattctggtccagaactgggatggtgctctagatgatttgaccaag 660
Query: 1089 ttgcgtgaattcatcgacaacggtggcggcggcgccaccgtcaacaatatgcaggccctt 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgcgtgaattcatcgacaacggtggcggcggcgccaccgtcaacaatatgcaggccctt 720
Query: 1149 caacagcgcacctggctcgtacactggtcactgttcgttttcttcaaccacgtcaagggt 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caacagcgcacctggctcgtacactggtcactgttcgttttcttcaaccacgtcaagggt 780
Query: 1209 cgcgaccttatcattgaaatgttcttatacaaaccattgtatttaaacgccatccagacg 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cgcgaccttatcattgaaatgttcttatacaaaccattgtatttaaacgccatccagacg 840
Query: 1269 atgtgtccccacatcctccgctacttggcaactgctgttatcataaacagatcgcgccgg 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atgtgtccccacatcctccgctacttggcaactgctgttatcataaacagatcgcgccgg 900
Query: 1329 aacgctcttaaggatctggtgaaagtaattcaacaggaagcatacacttacagagatcca 1388
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 901 aacgctcttaaggatctggtgaaagtaattcaacaagaagcatatacttacagagatcca 960
Query: 1389 atcactgaatttattgagcatctctatgtcaatttcgattttgaagcagctcgcaggaaa 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atcactgaatttattgagcatctctatgtcaatttcgattttgaagcagctcgcaggaaa 1020
Query: 1449 ttaaaccaatgtcaagcggttcttctcaccgatttcttcttaatagcgtgcttggaggaa 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ttaaaccaatgtcaagcggttcttctcaccgatttcttcttaatagcgtgcttggaggaa 1080
Query: 1509 ttcgtagagaatgcccgtcttatgatcttcgagaccttctgtcgtattcatcaagtcatc 1568
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttcgttgagaatgcccgtcttatgatcttcgagaccttctgtcgtattcatcaagtcatc 1140
Query: 1569 agtattggaatgttagc 1585
|||||||||||||||||
Sbjct: 1141 agtattggaatgttagc 1157
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 287,103
Number of extensions: 5784
Number of successful extensions: 5784
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5784
Number of HSP's successfully gapped: 1
Length of query: 2338
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2321
Effective length of database: 8,119,229
Effective search space: 18844730509
Effective search space used: 18844730509
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)