BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08118 (UTR included)
(2167 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_49_C1 1929 0.0
>BF14_49_C1
Length = 1363
Score = 1929 bits (973), Expect = 0.0
Identities = 1000/1009 (99%)
Strand = Plus / Plus
Query: 381 ttttttaatatattagaaagaaagaacaaaatgtccgcgacagcattgtttggcaacact 440
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 tttttaaatatataagaaagaaagaacaaaatgtccgcgacagcattgtttggcaacact 102
Query: 441 tcgggactgggaggcagttctggagggaataaacacttagttgagtttcgggctggtaga 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tcgggactgggaggcagttctggagggaataaacacttagttgagtttcgggctggtaga 162
Query: 501 atgactcttaaaggacgaatggtacatcccgacaagaggaagggtttattatatgtgtat 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atgactcttaaaggacgaatggtacatcccgacaagaggaagggtttattatatgtgtat 222
Query: 561 caaggtgaagactcattgatgcatttctgttggaaagatcgtacaactggagaagttgaa 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 caaggtgaagactcattgatgcatttctgttggaaagatcgtacaactggagaagttgaa 282
Query: 621 gatgacctattgatctttccggatgactgtgaatttgtaagagttaatgaatgtacaacc 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gatgacctattgatctttccggatgactgtgaatttgtaagagttaatgaatgtacaacc 342
Query: 681 ggaagagtatatgtattgaaatttaaatcattttcaaagaaatatttcttttggatgcag 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggaagagtatatgtattgaaatttaaatcattttcaaagaaatatttcttttggatgcag 402
Query: 741 gagccaaaaacagacaaggatgatgaatattgtcgccgtctcaatgaagcgttgaataac 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gagccaaaaacagacaaggatgatgaatattgtcgccgtctcaatgaagcgttgaataac 462
Query: 801 ccaccaacttccggtggtcgtggtggtagcggcggtggtgcccaagatggagacttacac 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ccaccaacttccggtggtcgtggtggtagcggcggtggtgcccaagatggagacttacac 522
Query: 861 aaccttcttaacaacatgtcacaacagcaattgatgcagttatttggtggtgttggtcag 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aaccttcttaacaacatgtcacaacagcaattgatgcagttatttggtggtgttggtcag 582
Query: 921 attggtggattatcatcactgctgggaactatgggcaacaacagtagcagtggcaacgca 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 attggtggattatcatcactgctgggaactatgggcaacaacagtagcagtggcaacgca 642
Query: 981 actcgtccatctggaaatagcagcaattcccgtggtggttcggcacctcggtctgagccc 1040
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 643 actcgtccatctgggaatagcagcaattcccgtggtggttcagcacctcggtctgaaccc 702
Query: 1041 acaacacgtacatcagcacgagctcgtgatgaacgcacacctgttcccatcgttgccccc 1100
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 703 acaacacgtacaccagcacgagctcgtgatgaacgcacacctgttcccattgttgccccc 762
Query: 1101 acacccgctactgttcccgcccctactgccaccccacccaacactgccactggaactcaa 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 acacccgctactgttcccgcccctactgccaccccacccaacactgccactggaactcaa 822
Query: 1161 cctcgcagtggtcagatatttctatccgacctgcagcggtacttctccggtctaggcaac 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 cctcgcagtggtcagatatttctatccgacctgcagcggtacttctccggtctaggcaac 882
Query: 1221 gcacctccggagggcgaaggcgcggtgggtgggacgggggcttcccgcgtggagttgggg 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 gcacctccggagggcgaaggcgcggtgggtgggacgggggcttcccgcgtggagttgggg 942
Query: 1281 gctgcgctggcgactccggaggtggtgtcaacggccagcgagccggctaactcccagcgc 1340
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gctgcgctggcgactccagaggtggtgtcaacggccagcgagccggctaactcccagcgc 1002
Query: 1341 ctcgcccctcacctgccgcccgcgccgcccgccgccccccaggacgatg 1389
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1003 ctcgcccctcacctgccgcccgcgccgcccgccgccccgcaggacgatg 1051
Score = 563 bits (284), Expect = e-160
Identities = 306/313 (97%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 1425 gcagccaatcagttttcatcggctcttacatccggtcaaatgggaccagtcatgacacag 1484
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1051 gcagccaatcagttttcatcggctcttacatccggtcaaatgggaccagtaatgacacag 1110
Query: 1485 tttgggcttccggctgacgtcactacagccgccaacacgggagacatgcaggccttcttt 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1111 tttgggcttccggctgacgtcactacagccgccaacacgggagacatgcaggctttcttt 1170
Query: 1545 aaagccttggagagtgcgtcttcatccgaaagcggaaagtcggaaggagacagaaagaaa 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 aaagccttggagagtgcgtcttcatccgaaagcggaaagtcggaaggagacagaaagaaa 1230
Query: 1605 gataaacctcaagatgacaaaaatgacaaaaaagatggtgatgctggaatgtcactcgat 1664
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1231 gataaacctcaagatgacaaaaatgacaannnagatggtgatgctggaatgtcactcgat 1290
Query: 1665 taatacaatgagattaattgtattcatcatatattttcatatttatatttg-aaagaaaa 1723
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 1291 taatacaatgagattaattgtattcatcatatattttcgtatttatatttgaaaagaaaa 1350
Query: 1724 tctaatggtttgt 1736
|||||||||||||
Sbjct: 1351 tctaatggtttgt 1363
Score = 77.8 bits (39), Expect = 7e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 224 taaacggcagtagaaacaacaaataacagagtcctttag 262
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4 taaacggcagtagaaacaacaaataacagagtcctttag 42
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 285,488
Number of extensions: 6732
Number of successful extensions: 6732
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6731
Number of HSP's successfully gapped: 3
Length of query: 2167
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2150
Effective length of database: 8,119,229
Effective search space: 17456342350
Effective search space used: 17456342350
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)