BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08120 (UTR included)
(1231 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B2G05 1116 0.0
BF01043A1G04 860 0.0
>BF01044B2G05
Length = 786
Score = 1116 bits (563), Expect = 0.0
Identities = 645/672 (95%), Gaps = 19/672 (2%)
Strand = Plus / Plus
Query: 1 taatatatcacatttcacattgaaaaaaaaatttttttcaagttgattttattttttcaa 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 90 taatatatcacatttcacattgaaaaaaat-tttttttcaagttgattttattttttcaa 148
Query: 61 taactatttgacatccaatacatgtttattttctcaaaagagccaccgtaagttgtatcg 120
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 taactattggtcatccaatacatgtttattttctcaaaagagccaccgtaagttgtatcg 208
Query: 121 ttagatggcgctggagacacgcacccagcgaattgaaaattacccattacaaaaactatg 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 209 ttagatggcgctggagtcacgcacccagcgaattgaaaattacccattacaaaaactagg 268
Query: 181 cgaaccctcccagagctcagcctattgtt-------------gacatcgtcaactttgtc 227
||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 269 cgaaccctcccagagctcagcctattgttattttacaaagttgacatcgtcaactttgtc 328
Query: 228 aacttttgtaaaattcctactaagttaattcaagttttctaaattgctattaaataataa 287
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 329 aacttttgtaaaattcctactaagttaattcaagttttctaaattgctattaaatattaa 388
Query: 288 ctaacttactttaataagaataacatagtttcgtcttttat--gtttttttctattgctg 345
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 389 ctaacttactttaataagaataacatagtttcgtcttttattggtttttttctattgatg 448
Query: 346 atctttagacgattgagttacctgtttgtgagactgccttataataagcagagagctaaa 405
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 449 atctttagacgattgagttacctgtttgtgagactgccttataa---gcagagagctaaa 505
Query: 406 ataacatttatatttataaaatgccttttttagaaaattttgatccagcaacatcggata 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ataacatttatatttataaaatgccttttttagaaaattttgatccagcaacatcggata 565
Query: 466 gagaacgtcgaaaattgaatcgtaaaaattatttcatgaaccgcaaaaataagaagattt 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gagaacgtcgaaaattgaatcgtaaaaattatttcatgaaccgcaaaaataagaagattt 625
Query: 526 acaatgaacgcggtcttatagcttcgacaggcaaagatctttgtgattgtctagatgaaa 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 acaatgaacgcggtcttatagcttcgacaggcaaagatctttgtgattgtctagatgaaa 685
Query: 586 cttgcccaggttgccattttccatgtcctaaatgcaattccaacaaatgtggacatgagt 645
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 686 cttgcccaggttgccattttccatgtcctaagtgcaattccaacaaatgtggacatgagt 745
Query: 646 gcagatgtaaca 657
||||||||||||
Sbjct: 746 gcagatgtaaca 757
>BF01043A1G04
Length = 778
Score = 860 bits (434), Expect = 0.0
Identities = 496/518 (95%), Gaps = 14/518 (2%)
Strand = Plus / Minus
Query: 1 taatatatcacatttcacattgaaaaaaaaatttttttcaagttgattttattttttcaa 60
|||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 774 taatatatcacacttcacattgaaaaaaat-tttttttcaagttgattttattttttcaa 716
Query: 61 taactatttgacatccaatacatgtttattttctcaaaagagccaccgtaagttgtatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 taactatttgacatccaatacatgtttattttctcaaaagagccaccgtaagttgtatcg 656
Query: 121 ttagatggcgctggagacacgcacccagcgaattgaaaattacccattacaaaaactatg 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 655 ttagatggcgctggagtcacgcacccagcgaattgaaaattacccattacaaaaactagg 596
Query: 181 cgaaccctcccagagctcagcctattgtt-------------gacatcgtcaactttgtc 227
||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 595 cgaaccctcccagagctcagcctattgttattttacaaagttgacatcgtcaactttgtc 536
Query: 228 aacttttgtaaaattcctactaagttaattcaagttttctaaattgctattaaataataa 287
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 535 aacttttgtaaaaatcctactaagttaatttaagttttctaaattgctattaaataataa 476
Query: 288 ctaacttactttaataagaataacatagtttcgtcttttatgtttttttctattgctgat 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 475 ctaacttactttaataagaataacatagtttcgtcttttatgtttttttctattgatgat 416
Query: 348 ctttagacgattgagttacctgtttgtgagactgccttataataagcagagagctaaaat 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 415 ctttagacgattgagttacctgtttgtgagactgccttataataagcagagagcttaaat 356
Query: 408 aacatttatatttataaaatgccttttttagaaaattttgatccagcaacatcggataga 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aacatttatatttataaaatgccttttttagaaaattttgatccagcaacatcggataga 296
Query: 468 gaacgtcgaaaattgaatcgtaaaaattatttcatgaa 505
||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gaacgtcgaaaattgaatcgtaaaaattatttcatgaa 258
Score = 285 bits (144), Expect = 8e-77
Identities = 144/144 (100%)
Strand = Plus / Minus
Query: 506 ccgcaaaaataagaagatttacaatgaacgcggtcttatagcttcgacaggcaaagatct 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ccgcaaaaataagaagatttacaatgaacgcggtcttatagcttcgacaggcaaagatct 127
Query: 566 ttgtgattgtctagatgaaacttgcccaggttgccattttccatgtcctaaatgcaattc 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 ttgtgattgtctagatgaaacttgcccaggttgccattttccatgtcctaaatgcaattc 67
Query: 626 caacaaatgtggacatgagtgcag 649
||||||||||||||||||||||||
Sbjct: 66 caacaaatgtggacatgagtgcag 43
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 221,313
Number of extensions: 4945
Number of successful extensions: 4945
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4939
Number of HSP's successfully gapped: 5
Length of query: 1231
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1214
Effective length of database: 8,119,229
Effective search space: 9856744006
Effective search space used: 9856744006
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)