BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08128 (UTR included)
(2239 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1478_C1 1534 0.0
>BF14_1478_C1
Length = 1074
Score = 1534 bits (774), Expect = 0.0
Identities = 786/790 (99%)
Strand = Plus / Plus
Query: 1450 tgtctctggacccgttcctgtcgggcatcagcgagcacacgcgccaggaatcagctgaca 1509
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3 tgtctctggacccgttcctgtcgggcatcagcgagcacacgcgtcaggaatcagctgaca 62
Query: 1510 gcgggctgggcatggtacagtactcagtgcctcacacgccggaggacttcctcgccagta 1569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gcgggctgggcatggtacagtactcagtgcctcacacgccggaggacttcctcgccagta 122
Query: 1570 tggacgaccgtatggacgtggccagcgaacccggcgcgcccatggacgctgacatcacac 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tggacgaccgtatggacgtggccagcgaacccggcgcgcccatggacgctgacatcacac 182
Query: 1630 tcggagacactgatctgctcggagacttcacaaatgatattctagacgacgtacagtctc 1689
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcggagacactgttctgctcggagacttcacaaatgatattctagacgacgtacagtctc 242
Query: 1690 tgataaattcgacgcctaacaagccagataacgttttaacctggctgtagacgtcggctg 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tgataaattcgacgcctaacaagccagataacgttttaacctggctgtagacgtcggctg 302
Query: 1750 actgtcgtcatgtcggcgggcagtgtcggcgagtccgcgtgttgtctgcatgtctgctag 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 actgtcgtcatgtcggcgggcagtgtcggcgagtccgcgtgttgtctgcatgtctgctag 362
Query: 1810 tttgggtgtcgtttgcggcgacatttaaaaacttttattagttgttacatatgtcatacg 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttgggtgtcgtttgcggcgacatttaaaaacttttattagttgttacatatgtcatacg 422
Query: 1870 atgtagagtacttacagcttccgataacgtcgtctataaaccgacagttatggtgtacat 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atgtagagtacttacagcttccgataacgtcgtctataaaccgacagttatggtgtacat 482
Query: 1930 ttcaataaacggcagtatatagtaacgtgtgagtgtgcggacggtcaggagcactgtaga 1989
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 483 ttcaataaacggcagtatatagtaacgtgtgagtgtgcggacggtcaggatcactgtaga 542
Query: 1990 tgaattaacttgtagctaacattgtccagaggtgccttagtttaatgttcaaaatttcat 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgaattaacttgtagctaacattgtccagaggtgccttagtttaatgttcaaaatttcat 602
Query: 2050 gtctccgcatttacccgaatgagacaaatgatggttatgcgacgtcttggataaatgcgt 2109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gtctccgcatttacccgaatgagacaaatgatggttatgcgacgtcttggataaatgcgt 662
Query: 2110 ttgttaaagcgggcattcgatataccaaatcgtcgagtatctcaatatgacaaaatgtgt 2169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ttgttaaagcgggcattcgatataccaaatcgtcgagtatctcaatatgacaaaatgtgt 722
Query: 2170 ttctagcacgaggtggcgtctatcgaaaatcggtaaaaacttctttggaccgagcaaagt 2229
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 723 ttctagcacgaggtggcgtctatcgaaaatcggtaaaaacttctttggaccgagcagagt 782
Query: 2230 atgtgtaaac 2239
||||||||||
Sbjct: 783 atgtgtaaac 792
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 162,441
Number of extensions: 2631
Number of successful extensions: 2631
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2631
Number of HSP's successfully gapped: 1
Length of query: 2239
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2222
Effective length of database: 8,119,229
Effective search space: 18040926838
Effective search space used: 18040926838
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)