BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08135 (UTR included)
(2599 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A1G09 676 0.0
>BF01005A1G09
Length = 796
Score = 676 bits (341), Expect = 0.0
Identities = 344/345 (99%)
Strand = Plus / Plus
Query: 926 aaacacaattatagtccaatacgacccatatgttcaagaagtgtgggatcaagcacgaaa 985
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aaacacaatcatagtccaatacgacccatatgttcaagaagtgtgggatcaagcacgaaa 61
Query: 986 gttgagatgcacgtggtacgacttttacgagaaagcagtcacgttcagacctttccaagt 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gttgagatgcacgtggtacgacttttacgagaaagcagtcacgttcagacctttccaagt 121
Query: 1046 tgatatgttacacgctgttacagctaactttctcggggacaatctgcaatgctggatgca 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgatatgttacacgctgttacagctaactttctcggggacaatctgcaatgctggatgca 181
Query: 1106 aatacaagttggaaaaggcccttgggcatcggaagtatctggtatagttaaaataggaca 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aatacaagttggaaaaggcccttgggcatcggaagtatctggtatagttaaaataggaca 241
Query: 1166 aacgatgacaatggttcttgctatcaaagatgacgaaaataaattcgacatgcttgtaag 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aacgatgacaatggttcttgctatcaaagatgacgaaaataaattcgacatgcttgtaag 301
Query: 1226 aaactgcgtggcccatgatggaaaacgggcaccgattcagctagt 1270
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaactgcgtggcccatgatggaaaacgggcaccgattcagctagt 346
Score = 567 bits (286), Expect = e-161
Identities = 293/296 (98%)
Strand = Plus / Plus
Query: 1269 gtatgtcgctataattgccctgaaccaaagtgcggagggctaggtgctgattatggagtg 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtatgtcgctataattgccctgaaccaaagtgcggagggctaggtgctgattatggagtg 560
Query: 1329 cctttacttggtggaaatgcattgagcgcaggagaatatggtttaccaaacgcgggacat 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctttacttggtggaaatgcattgagcgcaggagaatatggtttaccaaacgcgggacat 620
Query: 1389 ggcgaatatggtcccccgccaccagtacctcactcagagtatggagtaccccctgcattc 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggcgaatatggtcccccgccaccagtacctcactcagagtatggagtaccccctgcattc 680
Query: 1449 ccggaccctcgtcatccagccgacgttgctggggcatactctgaaaagcgagacgatacc 1508
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccggaccctcgtcatccagccgatgttgctggggcatactctgaaaagcgagacgatacc 740
Query: 1509 gtacctccaccccaagcgcaggtttcatctacccctaacgcacctagtccatcatc 1564
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 741 gtacctccaccccaagcgcanntttcatctacccctaacgcacctagtccatcatc 796
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 231,340
Number of extensions: 3831
Number of successful extensions: 3831
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3831
Number of HSP's successfully gapped: 2
Length of query: 2599
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2582
Effective length of database: 8,119,229
Effective search space: 20963849278
Effective search space used: 20963849278
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)