BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08146 (UTR included)
(1990 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B2E10 581 e-165
BF01030B2E07 527 e-149
>BF01042B2E10
Length = 755
Score = 581 bits (293), Expect = e-165
Identities = 315/325 (96%)
Strand = Plus / Plus
Query: 1207 tataccaaaaaaccgagtctgtgataaaatcaaccgccgagaagacgacgtccatactgg 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tataccaaaaaaccgagtctgtgataaaatcaaccgccgagaagacgacgtccatactgg 490
Query: 1267 gaggcatcacggccggtgtgagcagcaagctcggccagatgaggaactcggagtcgttca 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gaggcatcacggccggtgtgagcagcaagctcggccagatgaggaactcggagtcgttca 550
Query: 1327 ggtccatcgaggagcgtgtggggagcgcttacgaaaacgttaagggtaaggtagcgtccc 1386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggtccatcgaggagcgtgtggggagcgcttacgaaaacgttaagggtaaggtagcgtccc 610
Query: 1387 gttccaactctactcagagctttgacgaggccctccgtgacgcgagtcgctctgctagcg 1446
||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||
Sbjct: 611 gttccaactctactcagngctttgacgnnnctctccgtgacgcgagtcgctctgctagcg 670
Query: 1447 gcgccacctccccctccataccggagaacaaagcactgccctaatgacacacacaaacac 1506
|||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 671 gcgcaacctccccctccataccggnnnncaaagcactgccctaatgacacacacaaacac 730
Query: 1507 acactaatgccacgccgcattgaca 1531
|||||||||||||||||||||||||
Sbjct: 731 acactaatgccacgccgcattgaca 755
Score = 519 bits (262), Expect = e-147
Identities = 268/270 (99%)
Strand = Plus / Plus
Query: 878 agccgaggaagcaatgcctgggtctggtgctggagacgctcacactcctgacgagctggc 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 agccgaggaagcaatgcctgggtctggtgctggagacgctcacactcctgacgagctggc 221
Query: 938 aggtctcactccggaacaggcggaacaactgcgagctgaatggagccgggaactggcgag 997
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 222 aggtctcactccggaacaggcggaacaactacgagctgaatggagccgggaactggcgag 281
Query: 998 ggtagaagacgagatatccaccctgagaactgtgttacagagcaaaatccgccagagctc 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ggtagaagacgagatatccaccctgagaactgtgttacagagcaaaatccgccagagctc 341
Query: 1058 cgatttgaaacgtaaacttggcatcacggtatggaaggagataacggaggacgtcaacca 1117
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 342 cgatttgaaacgtaaacttggcatcaccgtatggaaggagataacggaggacgtcaacca 401
Query: 1118 gggcttgaagaacgtcaaagagagccaagt 1147
||||||||||||||||||||||||||||||
Sbjct: 402 gggcttgaagaacgtcaaagagagccaagt 431
>BF01030B2E07
Length = 716
Score = 527 bits (266), Expect = e-149
Identities = 269/270 (99%)
Strand = Plus / Plus
Query: 878 agccgaggaagcaatgcctgggtctggtgctggagacgctcacactcctgacgagctggc 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agccgaggaagcaatgcctgggtctggtgctggagacgctcacactcctgacgagctggc 241
Query: 938 aggtctcactccggaacaggcggaacaactgcgagctgaatggagccgggaactggcgag 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggtctcactccggaacaggcggaacaactgcgagctgaatggagccgggaactggcgag 301
Query: 998 ggtagaagacgagatatccaccctgagaactgtgttacagagcaaaatccgccagagctc 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggtagaagacgagatatccaccctgagaactgtgttacagagcaaaatccgccagagctc 361
Query: 1058 cgatttgaaacgtaaacttggcatcacggtatggaaggagataacggaggacgtcaacca 1117
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 362 cgatttgaaacgtaaacttggcatcaccgtatggaaggagataacggaggacgtcaacca 421
Query: 1118 gggcttgaagaacgtcaaagagagccaagt 1147
||||||||||||||||||||||||||||||
Sbjct: 422 gggcttgaagaacgtcaaagagagccaagt 451
Score = 327 bits (165), Expect = 4e-89
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 1207 tataccaaaaaaccgagtctgtgataaaatcaaccgccgagaagacgacgtccatactgg 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tataccaaaaaaccgagtctgtgataaaatcaaccgccgagaagacgacgtccatactgg 510
Query: 1267 gaggcatcacggccggtgtgagcagcaagctcggccagatgaggaactcggagtcgttca 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gaggcatcacggccggtgtgagcagcaagctcggccagatgaggaactcggagtcgttca 570
Query: 1327 ggtccatcgaggagcgtgtggggagcgcttacgaaaacgttaagg 1371
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggtccatcgaggagcgtgtggggagcgcttacgaaaacgttaagg 615
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 196,564
Number of extensions: 3539
Number of successful extensions: 3539
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3539
Number of HSP's successfully gapped: 4
Length of query: 1990
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1973
Effective length of database: 8,119,229
Effective search space: 16019238817
Effective search space used: 16019238817
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)