BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08149 (UTR included)
(6640 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B2B04 1518 0.0
BF01007X1H04 1419 0.0
>BF01005B2B04
Length = 794
Score = 1518 bits (766), Expect = 0.0
Identities = 785/791 (99%), Gaps = 1/791 (0%)
Strand = Plus / Plus
Query: 346 ctatagtcgcattgccgcgctgtttcttgttagattgaattcaaaatggcgtcagtactc 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ctatagtcgcattgccgcgctgtttcttgttagattgaattcaaaatggcgtcagtactc 64
Query: 406 gattgtgtttatagatagacgcgatggcatgtgtgttcaaagttggctaaaaatagagga 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gattgtgtttatagatagacgcgatggcatgtgtgttcaaagttggctaaaaatagagga 124
Query: 466 cttgcataaagctcattgtattaatagttgttaaaatgtctaacacagttattactaatt 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cttgcataaagctcattgtattaatagttgttaaaatgtctaacacagttattactaatt 184
Query: 526 acacggacttaaatggaccctcaacgaaatctgataattctgtggttgttattgtaaaca 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 acacggacttaaatggaccctcaacgaaatctgataattctgtggttgttattgtaaaca 244
Query: 586 aggatggatcgttgtcggttgatcagaatttacttggtactctaatgggtacagatggtt 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aggatggatcgttgtcggttgatcagaatttacttggtactctaatgggtacagatggtt 304
Query: 646 ctcaatctgctggtatcagtgttgtgcgtgttgggcatgaggggcggccagatgatgcta 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctcaatctgctggtatcagtgttgtgcgtgttgggcatgaggggcggccagatgatgcta 364
Query: 706 ctgactcagagaatgaagatgataaagtgcctcatgttacattatcagtagacagctatt 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctgactcagagaatgaagatgataaagtgcctcatgttacattatcagtagacagctatt 424
Query: 766 acaatgaacctgccagcataatcaaatatgatagtggagcagaaatgttacagtcattga 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acaatgaacctgccagcataatcaaatatgatagtggagcagaaatgttacagtcattga 484
Query: 826 gaatagaaactagagaaaatagccttgtaggctttcaaaatgatcattgttatacaccac 885
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 485 gaatagaaactagagaaaatagccttgtaggctttcaaaatgatcattgttatacacctc 544
Query: 886 ttacatcaccaagtcaaataataccacagagaaatgacagttttgcagcttatgatgatc 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttacatcaccaagtcaaataataccacagagaaatgacagttttgcagcttatgatgatc 604
Query: 946 cagttattgaaataactaatacaccaccacccaaaccagtggcaacacccaaaaagataa 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cagttattgaaataactaatacaccaccacccaaaccagtggcaacacccaaaaagataa 664
Query: 1006 ccatattggaacagcaaatcattccgaaagggaaaaaaatcattttaaacacatcagagc 1065
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ccatattggaacagcaaatcattccgaaagggaaaaaaatcattttaaacacatcagnnn 724
Query: 1066 cacctataattcttaaaggaaatgacattttaactaaacccttaccagtgctaatgaaat 1125
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cacctataattcttaaa-gtaatgacattttaactaaacccttaccagtgctaatgaaat 783
Query: 1126 ctaaactacat 1136
|||||||||||
Sbjct: 784 ctaaactacat 794
>BF01007X1H04
Length = 747
Score = 1419 bits (716), Expect = 0.0
Identities = 732/736 (99%), Gaps = 1/736 (0%)
Strand = Plus / Plus
Query: 5829 ggatcagcgtctaacagtagcagtgccccgggaccctcgctaccaccaaatacattgaga 5888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ggatcagcgtctaacagtagcagtgccccgggaccctcgctaccaccaaatacattgaga 72
Query: 5889 agtaaaatggaggaattgaacagacagattgaagagcaaaaacaacaaatacttaaaatg 5948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 agtaaaatggaggaattgaacagacagattgaagagcaaaaacaacaaatacttaaaatg 132
Query: 5949 gcacaagccgactcatccgctgacggcgaaaacgaggcctactcgccatcgagaccgctg 6008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gcacaagccgactcatccgctgacggcgaaaacgaggcctactcgccatcgagaccgctg 192
Query: 6009 accccgcccgctcccgtggttacattggatgaaatagcactaccttcaaatcttcaagag 6068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 accccgcccgctcccgtggttacattggatgaaatagcactaccttcaaatcttcaagag 252
Query: 6069 atccttgccacaatcaaacaaagatccgagactgccgcagatgttgacatgcgtacatta 6128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atccttgccacaatcaaacaaagatccgagactgccgcagatgttgacatgcgtacatta 312
Query: 6129 cctatgccttaagttatataatttacaaataaaaaaaaaatatatattttatattaaata 6188
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 313 cctatgccttaagttatataatttacaaattaaaa-aaaatatatattttatattaaata 371
Query: 6189 atagtttgttatatgcagtgtcgatttagtattaagttgtagatataacgcgttatcatc 6248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 atagtttgttatatgcagtgtcgatttagtattaagttgtagatataacgcgttatcatc 431
Query: 6249 tacattctacatggaaaactccagtacatattaaacttcttggttttttgtatttgagga 6308
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 432 tacattctacatggaaaactccagtacatattaaacttcttagttttttgtatttgagga 491
Query: 6309 gtatgataggcgaatgtattaatatatgcaaagcatataagtagggaattcgatagaaca 6368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gtatgataggcgaatgtattaatatatgcaaagcatataagtagggaattcgatagaaca 551
Query: 6369 ttttaaagtgcaataggatatgatatatgttttacggagataataaacaatgattagtta 6428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttttaaagtgcaataggatatgatatatgttttacggagataataaacaatgattagtta 611
Query: 6429 atcacggtaaccttaataattacatattagattccaaggtataacatatttataaatgta 6488
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 atcacagtaaccttaataattacatattagattccaaggtataacatatttataaatgta 671
Query: 6489 aattcttgaagcgcattctgtttaagagctgaaaataaatgtataaaagcttacccttaa 6548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aattcttgaagcgcattctgtttaagagctgaaaataaatgtataaaagcttacccttaa 731
Query: 6549 ataactattgttactg 6564
||||||||||||||||
Sbjct: 732 ataactattgttactg 747
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 124,500
Number of extensions: 14901
Number of successful extensions: 14901
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 14899
Number of HSP's successfully gapped: 2
Length of query: 6640
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6622
Effective length of database: 8,109,745
Effective search space: 53702731390
Effective search space used: 53702731390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)