BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08156 (UTR included)
(1786 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1B08 109 2e-23
BF01012A1E04 107 6e-23
BF01025B2E05 105 2e-22
BF01012A1B09 100 1e-20
BF01052B1F12 84 9e-16
BF14_729_C2 80 1e-14
BF01011A1H06 72 3e-12
>BF01056A1B08
Length = 761
Score = 109 bits (55), Expect = 2e-23
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 1449 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatatatttt 1503
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatatatttt 150
>BF01012A1E04
Length = 841
Score = 107 bits (54), Expect = 6e-23
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 1450 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatatatttt 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatatatttt 565
>BF01025B2E05
Length = 759
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 1447 taatgagatctaagactttcgcgagttttattcatttaaatgaaactaatatatttt 1503
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 taatgagatctaagactttcgcgagttttattcatttaaatgaaactagtatatttt 65
>BF01012A1B09
Length = 841
Score = 99.6 bits (50), Expect = 1e-20
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 1449 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatatattt 1502
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatattt 758
>BF01052B1F12
Length = 785
Score = 83.8 bits (42), Expect = 9e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 1449 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatat 1498
|||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 297 atgaaatctaagaatttcgcgagttttattcatttaaatgaaactaatat 346
>BF14_729_C2
Length = 1289
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 1447 taatgagatctaagactttcgcgagttttattcatttaaatgaaacta 1494
|||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 676 taatgagatctaagactttcgccagttttaatcatttaaatgaaacta 629
>BF01011A1H06
Length = 739
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 1447 taatgagatctaagactttcgcgagttttattcatttaaatgaa 1490
||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 608 taatgagatctaagattttcgcgacttttattcatttaaatgaa 565
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 291,808
Number of extensions: 7755
Number of successful extensions: 7755
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 7755
Number of HSP's successfully gapped: 7
Length of query: 1786
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1769
Effective length of database: 8,119,229
Effective search space: 14362916101
Effective search space used: 14362916101
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)