BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08197 (UTR included)
(1612 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B2E02 545 e-155
>BF01010B2E02
Length = 338
Score = 545 bits (275), Expect = e-155
Identities = 285/290 (98%)
Strand = Plus / Plus
Query: 668 acacgccgacccgcacgtgcaggtgcacgccgctactctcctggacgcgtgcgtcgctaa 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 acacgccgacccgcacgtgcaggtgcacgccgctactctcctggacgcgtgcgtcgctaa 108
Query: 728 ctgtggccgtgttttccacctcgaagtggcgtcgcgggacttcgaggccgagttccgtcg 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctgtggccgtgttttccacctcgaagtggcgtcgcgggacttcgaggccgagttccgtcg 168
Query: 788 cctgctgtctcgcgcccagcctcctgtcgccggccgtctccgcgctctgctgcgcaaatg 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 169 cctgctgtctcgcgcccagcctcctgtcgccggccgtctccgcgctctgctgcgcnnntg 228
Query: 848 ggccgaaggagagttccgcgacgatccccagctggatctcatcccctccctccacgccaa 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ggccgaaggagagttccgcgacgatccccagctggatctcatcccctccctccacgccaa 288
Query: 908 gctaagcgcggagtccggcgagcgcgtgtcgtcggccgccgcgcccgcag 957
||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 289 gctaagcgcggnntccggcgagcgcgtgtcgtcggccgccgcgcccgcag 338
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 187,040
Number of extensions: 3258
Number of successful extensions: 3258
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3258
Number of HSP's successfully gapped: 1
Length of query: 1612
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1595
Effective length of database: 8,119,229
Effective search space: 12950170255
Effective search space used: 12950170255
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)