BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08201 (UTR included)
(2170 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B2B12 1243 0.0
>BF01031B2B12
Length = 655
Score = 1243 bits (627), Expect = 0.0
Identities = 648/655 (98%)
Strand = Plus / Plus
Query: 411 aagggaggtcattaaattttttcattatcattaaaagttttggcgtagttacttgtgtta 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagggaggtcattaaattttttcattatcattaaaagttttggcgtagttacttgtgtta 60
Query: 471 ctttaaaagctaataattgttaaaattaaaatgagtgttatagtaacagcaaccgcctcg 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttaaaagctaataattgttaaaattaaaatgagtgttatagtaacagcaaccgcctcg 120
Query: 531 gttaacatagcagtaataaaatactggggtaaacgggatgaagaattaatattaccgtta 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttaacatagcagtaataaaatactggggtaaacgggatgaagaattaatattaccgtta 180
Query: 591 aatgattccataagtgccactttggacacaaacgttatgtgtgctagaacttcagtttgt 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgattccataagtgccactttggacacaaacgttatgtgtgctagaacttcagtttgt 240
Query: 651 gcgaggccagatatagaagaaaatgaaatgtatttgaatggaatcaagacttcatttgac 710
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgaggccagatatacaagaaaatgaaatgtatttgaatggaatcaagacttcatttgac 300
Query: 711 aataaacgtctgcagacctgtttaaataaaatcaaagctattgccactttacagaaagtt 770
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 301 aataaacgtctgcagacctgtttaaataaaatcaaagctattgcaactttacagaaagtt 360
Query: 771 gttgacaaagaatttttgtcctggaatgttcgaatttgttcggaaaacaattttccaact 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgacaaagaatttttgtcctggaatgttcgaatttgttcggaaaacaattttccaact 420
Query: 831 gccgctggattggcatcttccgcagcaggatatgcttgcttagtaactgctctagcgaaa 890
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctgctggattggcatcttccgcagcaggatatgcttgcttagtaactgctctagcgaaa 480
Query: 891 ttatataaaattgaatctgatataagtcaactagccagattggggtctggcagtgcatgc 950
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttatataaaattgaatctgatataagtcaactagccagattggggtctggcagtgcatgt 540
Query: 951 agaagtgtttttggtggtttcgttaggtggcacgccggtgggaagtgtgatggaagtgac 1010
|| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 541 aggagtgtttttggtggtttcgttaggtggcatgcgggtgggaagtgtgatggaagtgac 600
Query: 1011 tccacagcgtcacaaatagtccaatcaactcactggcctgaaatgagagtgctgg 1065
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tccacagcgtcacaaatagtccaatcaactcactggcctgaaatgagagtgctgg 655
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 375,577
Number of extensions: 9682
Number of successful extensions: 9682
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9682
Number of HSP's successfully gapped: 1
Length of query: 2170
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2153
Effective length of database: 8,119,229
Effective search space: 17480700037
Effective search space used: 17480700037
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)