BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08230 (UTR included)
(1423 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A2G08 1179 0.0
>BF01024A2G08
Length = 638
Score = 1179 bits (595), Expect = 0.0
Identities = 629/639 (98%), Gaps = 1/639 (0%)
Strand = Plus / Plus
Query: 379 ctaaaataatacatgtacatttaaggttataatttttttatatatatattttatagaaac 438
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ctaaaatcatacatgtacatttaaggttataattttttt-tatatatattttatagaaac 59
Query: 439 tgtttaatgtttatgtgcattatttttgttcaatacgattttgataaatactttttataa 498
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 60 tgtttaatgtttatgtgcattatttttgttcaatacgattatgataaatactttttataa 119
Query: 499 aaatggaaaaagcagaaaattttatagattattatcaaatattgcaaagtgaaaaatctg 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aaatggaaaaagcagaaaattttatagattattatcaaatattgcaaagtgaaaaatctg 179
Query: 559 catcaaacgaggagttaaagaaaagctaccagcgtttagtactggcttttcatcccgaca 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 catcaaacgaggagttaaagaaaagctaccagcgtttagtactggcttttcatcccgaca 239
Query: 619 aaagtggtaatgcggaggatgagaagtttcatctgattcaaaaagcgtggtctgttttga 678
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 240 aaagtggtaatgcggaggatgagaagtttcatctgattcaaaaagcgtggactgttttga 299
Query: 679 gggatccaatctctcgcaaacaatatgatgcagaattagcttgttatgaaaatactgatc 738
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gggatccaatttctcgcaaacaatatgatgcagaattagcttgttatgaaaatactgatc 359
Query: 739 ttttactctacgatacaatatctttatcagatatggacttcaatgctacagaagaattgt 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttttactctacgatacaatatctttatcagatatggacttcaatgctacagaagaattgt 419
Query: 799 actcatatcagtgtagatgcagtggtatttattacttagatgctagtgaactttttgaat 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 actcatatcagtgtagatgcagtggtatttattacttagatgctagtgaactttttgaat 479
Query: 859 cttcatttgaagttatcataagctgcaatgagtgctcattttgtgtcaaagtaaataaga 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cttcatttgaagttatcataagctgcaatgagtgctcattttgtgtcaaagtaaataaga 539
Query: 919 gatagtgtcagtatatataatatttgtctgttattatttaaaactattcatgtacctaca 978
|||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 540 gatagtgtcaatatatataatatttatctggtattatttaaaactattcatgtacctaca 599
Query: 979 aataaaaatgttaaacttatatgatataatgattttata 1017
|||||||||||||||||||| | ||||||||||||||||
Sbjct: 600 aataaaaatgttaaacttatttcatataatgattttata 638
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 313,174
Number of extensions: 22700
Number of successful extensions: 22700
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22698
Number of HSP's successfully gapped: 1
Length of query: 1423
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1406
Effective length of database: 8,119,229
Effective search space: 11415635974
Effective search space used: 11415635974
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)