BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08237 (UTR included)
(1879 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A2D10 1332 0.0
>BF01049A2D10
Length = 680
Score = 1332 bits (672), Expect = 0.0
Identities = 678/680 (99%)
Strand = Plus / Plus
Query: 523 tccgcaagtacccctgcctgtggaacactgcggccatcgagtaccgcgaccaggagctca 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccgcaagtacccctgcctgtggaacactgcggccatcgagtaccgcgaccaggagctca 60
Query: 583 aggacgccgcctgggccgaagtcatgaaggaaaccgacctatcctcggtgaaagaggtca 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggacgccgcctgggccgaagtcatgaaggaaaccgacctatcctcggtgaaagaggtca 120
Query: 643 aactcaaatggaagaaactccgcgacagttaccgtgatgccctcaagcggcagaacgaca 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aactcaaatggaagaaactccgcgacagttaccgtgatgccctcaagcggcagaacgaca 180
Query: 703 tgctcgctaaagaccccggaaactccaccaaaaagaactatccctggaagtacatgggcc 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgctcgctaaagaccccggaaactccaccaaaaagaactatccctggaagtacatgggcc 240
Query: 763 tgatgcagttcctgcagccccacatgagcgtccgtaagaagccggccgaatccccgcact 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatgcagttcctgcagccccacatgagcgtccgtaagaagccggccgaatccccgcact 300
Query: 823 acgcgagccccgcggaccagcaacaggccagctcaggcggcccgggcgggtccgcaggct 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgcgagccccgcggaccagcaacaggccagctcaggcggcccgggcgggtccgcaggct 360
Query: 883 cccaggcccatctccaccactcgcagatgtcccacaacgcacacaacggtgacccgcgat 942
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 361 cccaggcccatctccaccactcgcagatgtcccacaacgcacacaacggagacccgcgat 420
Query: 943 cctccgacgactccgactctgagcccgagtcctcccccaagcggaagagcagcgagcgtc 1002
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctccgacgactccgactccgagcccgagtcctcccccaagcggaagagcagcgagcgtc 480
Query: 1003 taaccgtcatcgaccgcaagctggactacctctgcaaggcggagagcaagcgacggtaca 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taaccgtcatcgaccgcaagctggactacctctgcaaggcggagagcaagcgacggtaca 540
Query: 1063 cggacgctcagtacagggaacggaagcgcgagcaccctcccgcggcgcccgatccgctcg 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggacgctcagtacagggaacggaagcgcgagcaccctcccgcggcgcccgatccgctcg 600
Query: 1123 atatcttctttaacagcatgtgtcagtccacgaagcgcttcccttaccctgcgcagatca 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atatcttctttaacagcatgtgtcagtccacgaagcgcttcccttaccctgcgcagatca 660
Query: 1183 agatcaagaagactctgttc 1202
||||||||||||||||||||
Sbjct: 661 agatcaagaagactctgttc 680
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 139,378
Number of extensions: 3106
Number of successful extensions: 3106
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3106
Number of HSP's successfully gapped: 1
Length of query: 1879
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1862
Effective length of database: 8,119,229
Effective search space: 15118004398
Effective search space used: 15118004398
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)