BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08271 (UTR included)
(1846 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3344_C2 1415 0.0
BF01005A1B05 987 0.0
BF14_3344_C1 803 0.0
>BF14_3344_C2
Length = 868
Score = 1415 bits (714), Expect = 0.0
Identities = 726/730 (99%)
Strand = Plus / Plus
Query: 390 aggtacaagagcggggtgcgctcagtgaggggtggcggcgggggcggcgaggagtcgcgt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 aggtacaagagcggggtgcgctcagtgaggggtggcggcgggggcggcgaggagtcgcgt 198
Query: 450 cgcggcggcctcaaggcactgccgaagcgcgcccggacacgctgcaggggtatgaacatg 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 cgcggcggcctcaaggcactgccgaagcgcgcccggacacgctgcaggggtatgaacatg 258
Query: 510 ggtcaaaagctatcgggcggtgtgaagtcggtgtcgcgcgagtgcacggcgccgttcaag 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggtcaaaagctatcgggcggtgtgaagtcggtgtcgcgcgagtgcacggcgccgttcaag 318
Query: 570 gcggtggttgcacgcgagctggcaccagagctgccgagacctgcgcgtcttgatgcgctc 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gcggtggttgcacgcgagctggcaccagagctgccgagacctgcgcgtcttgatgcgctc 378
Query: 630 ctggacgcgccgccagcgcatcacgacacgcagctcaagcacgcctggaacccagatgac 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctggacgcgccgccagcgcatcacgacacgcagctcaagcacgcctggaacccagatgac 438
Query: 690 cggtcgttgaatatattcgtgaaggaggaggacgcgttgacgttccatagacatcccgta 749
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 439 cgatcgttgaatatattcgtgaaggaggaggacgcgttgacgttccacagacatcccgta 498
Query: 750 gcccagtcgacggattgcatccgtgggcgcgtcgggtactcacgtgggctgcactgctgg 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gcccagtcgacggattgcatccgtgggcgcgtcgggtactcacgtgggctgcactgctgg 558
Query: 810 gaggttgtgtggccggcgaggcagaggggaacacacgcggtcgtgggcgtagcgaccgcc 869
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gaggttgtatggccggcgaggcagaggggaacacacgcggtcgtgggcgtagcgaccgcc 618
Query: 870 cacgcgcccttacactccgtgggctatcagagcctcgtgggcgccaccgatcagagttgg 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cacgcgcccttacactccgtgggctatcagagcctcgtgggcgccaccgatcagagttgg 678
Query: 930 ggctgggatcttggcaggaataaggtgtaccacaacgctaagggtacaggcagtagcggc 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ggctgggatcttggcaggaataaggtgtaccacaacgctaagggtacaggcagtagcggc 738
Query: 990 tgtacgtatccagcgctactgcgaccagatgaacagttcctcgtgccggaccgactgctg 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tgtacgtatccagcgctactgcgaccagatgaacagttcctcgtgccggaccgactgctg 798
Query: 1050 gtagttctggatatggacgagggcacgttgtccttctgcgccgatggaagatacctcggc 1109
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gtagttctggatatggacgagggcacgttgtccttctgcgccgatggaagatacctcggt 858
Query: 1110 gtggccttca 1119
||||||||||
Sbjct: 859 gtggccttca 868
>BF01005A1B05
Length = 745
Score = 987 bits (498), Expect = 0.0
Identities = 511/514 (99%), Gaps = 1/514 (0%)
Strand = Plus / Minus
Query: 1333 accgcgcgccctaaccacgattacgagcacaccgaacgtgtgcacgtggacagtgacgtg 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 accgcgcgccctaaccacgattacgagcacaccgaacgtgtgcacgtggacagtgacgtg 686
Query: 1393 ccaactgacagtacggacgtgtgccgcgtgttgcaacatcgattgtataactaccctcca 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccaactgacagtacggacgtgtgccgcgtgttgcaacatcgattgtataactaccctcca 626
Query: 1453 tttagtggatttgaagatgcgaacattgaagatccgtttggttttccaactgtaatatcc 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttagtggatttgaagatgcgaacattgaagatccgtttggttttccaactgtaatatcc 566
Query: 1513 atgtctattttttttgcatcgtaattcgtagcaagtatccggttatgacacaacatatac 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 atgtctattttttttgcatcgtaattcgtagcaagtatccggttatgacacaacataaac 506
Query: 1573 acaccacgttcagtcgattaccatataggtgtactgtgtgtgtgacgacccgtgaccgca 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acaccacgttcagtcgattaccatataggtgtactgtgtgtgtgacgacccgtgaccgca 446
Query: 1633 cttatatcacaatactatgaaaaatgtgtcaagtaaagattaccgcgtcgttacgaaaca 1692
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 445 cttatatcacaatactatgaaaaatgtgtcaagtaaagattaccgcgtcgtaacgaaaca 386
Query: 1693 acgccgatcgagtattttaaaaaaataattatattaacgaatcattcggacgattttatt 1752
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acgccgatcgagtattttaa-aaaataattatattaacgaatcattcggacgattttatt 327
Query: 1753 tgacatattttgatttattccgttgtgaatattttaatttttacactatctgtgataatt 1812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgacatattttgatttattccgttgtgaatattttaatttttacactatctgtgataatt 267
Query: 1813 atatttttaaagaaatcaccatttttatcacacc 1846
||||||||||||||||||||||||||||||||||
Sbjct: 266 atatttttaaagaaatcaccatttttatcacacc 233
>BF14_3344_C1
Length = 904
Score = 803 bits (405), Expect = 0.0
Identities = 414/418 (99%)
Strand = Plus / Plus
Query: 390 aggtacaagagcggggtgcgctcagtgaggggtggcggcgggggcggcgaggagtcgcgt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aggtacaagagcggggtgcgctcagtgaggggtggcggcgggggcggcgaggagtcgcgt 546
Query: 450 cgcggcggcctcaaggcactgccgaagcgcgcccggacacgctgcaggggtatgaacatg 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 cgcggcggcctcaaggcactgccgaagcgcgcccggacacgctgcaggggtatgaacatg 606
Query: 510 ggtcaaaagctatcgggcggtgtgaagtcggtgtcgcgcgagtgcacggcgccgttcaag 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ggtcaaaagctatcgggcggtgtgaagtcggtgtcgcgcgagtgcacggcgccgttcaag 666
Query: 570 gcggtggttgcacgcgagctggcaccagagctgccgagacctgcgcgtcttgatgcgctc 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gcggtggttgcacgcgagctggcaccagagctgccgagacctgcgcgtcttgatgcgctc 726
Query: 630 ctggacgcgccgccagcgcatcacgacacgcagctcaagcacgcctggaacccagatgac 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ctggacgcgccgccagcgcatcacgacacgcagctcaagcacgcctggaacccagatgac 786
Query: 690 cggtcgttgaatatattcgtgaaggaggaggacgcgttgacgttccatagacatcccgta 749
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 787 cgatcgttgaatatattcgtgaaggnnnaggacgcgttgacgttccatagacatcccgta 846
Query: 750 gcccagtcgacggattgcatccgtgggcgcgtcgggtactcacgtgggctgcactgct 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gcccagtcgacggattgcatccgtgggcgcgtcgggtactcacgtgggctgcactgct 904
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 177,831
Number of extensions: 3704
Number of successful extensions: 3704
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3703
Number of HSP's successfully gapped: 3
Length of query: 1846
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1829
Effective length of database: 8,119,229
Effective search space: 14850069841
Effective search space used: 14850069841
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)