BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08278 (UTR included)
(5053 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009B1F01 1463 0.0
>BF01009B1F01
Length = 803
Score = 1463 bits (738), Expect = 0.0
Identities = 786/803 (97%)
Strand = Plus / Plus
Query: 2724 accaagaaagacgaagggaaaatggagtatctatgggttgaagacgatatatgtgaagtt 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaagaaagacgaagggaaaatggagtatctatgggttgaagacgatatatgtgaagtt 60
Query: 2784 caaatgaaacttactaatccgctgccatttgaactgaaagtgtccaacatgcggcttttg 2843
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 61 caaatgaaacttactaatccgctgccatttgaactgaaagtgtcaaacatgcggctcttg 120
Query: 2844 acttcgggggttgtatttgagtctataccggagacaataatcctgccccccgattcccct 2903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acttcgggggttgtatttgagtctataccggagacaataatcctgccccccgattcccct 180
Query: 2904 accacagttaaccttcacggcactcccaaggaagtcggcgaacttctcatactcggttac 2963
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accacagttaaccttcacggtactcccaaggaagtcggcgaacttctcatactcggttac 240
Query: 2964 tcaactcacacgctaggcgtgaaatcgaattgcagactcaaaaacatgccaatgccacat 3023
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 241 tcaactcacacgctaggcgtgaaatcgaattgcagactcaaaaatatgccaatgccacat 300
Query: 3024 aaatttccctctgcgttttctatcgaggtcataccaagtctgccgagaatctccatagag 3083
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 301 aaatttccctctgcgttttctatcgaggtcataccaagtctgccgaggatctctatagag 360
Query: 3084 acgacactcacgctatccggcaacgtgaacatatcaaatccggagatatcagccagcgtc 3143
|| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 361 acaacactcacgctatccggcaacgtgaacatattaaatccggagatatcagcaagcgtc 420
Query: 3144 acaaatatatcgctgtataacggagagagcactgagtgtaccataaagatcaccaacacg 3203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaaatatatcgctgtataacggagagagcactgagtgtaccataaagatcaccaacacg 480
Query: 3204 agcaacgtggcaattgaatacttagatctattgattcagtcaaacatggacaatcagtta 3263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agcaacgtggcaattgaatacttagatctattgattcagtcaaacatggacaatcagtta 540
Query: 3264 cagagaaaagtgttccagtggtcgaatgaacatatccagtcccagctgccgataaaaccc 3323
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 541 cagagaaaagtgttccagtggtcgaatgaagatatccagtcccagctgccgataaaaccc 600
Query: 3324 accgacatagcatccatacccataaccctttacggcgaagctgacttccttgatctgggc 3383
| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 601 agcgacgtagcatccatacccataaccctttacggcgaagctgatttccttgatctgggc 660
Query: 3384 ggtgaaaacatcttccccaacagcctcacatccaactacccgtcgagggtcggttccccc 3443
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ggtgaaaacgtcttccccaacagcctcacatccaactacccgtcgagggtcggttccccc 720
Query: 3444 gtaccaaacgcacaaacgtcgctaccaacgcagagttcaaaccaacagaattcacttagt 3503
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 721 gtaccaaacgcacaaacgtcgctaccaacgcagnnntcaaaccaacagaattcacttagt 780
Query: 3504 agcggtctcatggttaacaggac 3526
|||||||||||||||||||||||
Sbjct: 781 agcggtctcatggttaacaggac 803
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 530,280
Number of extensions: 9890
Number of successful extensions: 9890
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9890
Number of HSP's successfully gapped: 1
Length of query: 5053
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5035
Effective length of database: 8,109,745
Effective search space: 40832566075
Effective search space used: 40832566075
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)