BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08302 (UTR included)
(1669 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2771_C1 827 0.0
BF14_2674_C1 468 e-131
>BF14_2771_C1
Length = 1102
Score = 827 bits (417), Expect = 0.0
Identities = 420/421 (99%)
Strand = Plus / Plus
Query: 829 ggcatatagaaccacaccgaccagtgtttgcattggttggatgtaaagttgaccttgttg 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggcatatagaaccacaccgaccagtgtttgcattggttggatgtaaagttgaccttgttg 61
Query: 889 gatctgataataagaatggtgcaaggagagaagtatcctgtgaggaggccaggatgtttg 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gatctgataataagaatggtgcaaggagagaagtatcctgtgaggaggccaggatgtttg 121
Query: 949 ctgaagaaaatggacttcatcacgtcgagacatcagcaaaaacgggcctgaatgtggaac 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctgaagaaaatggacttcatcacgtcgagacatcagcaaaaacgggcctgaatgtggaac 181
Query: 1009 aagcattcatacttgtggctcaggaagtgtataatcgcatacaaacaggtgagtacaaag 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aagcattcatacttgtggctcaggaagtgtataatcgcatacaaacaggtgagtacaaag 241
Query: 1069 tggaggacggctgggatggaataaagacaggttttaaccgaccaaatggtatggacttca 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tggaggacggctgggatggaataaagacaggttttaaccgaccaaatggtatggacttca 301
Query: 1129 atctactcgaagcagaaacagttcagtccacctgctgctagaagaacatcatattgtgac 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atctactcgaagcagaaacagttcagtccacctgctgctagaagaacatcatattgtgac 361
Query: 1189 aacttcggtagcaagatacatccaatgtcgtgacataatttgtaatacagtttctcaatc 1248
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 362 aacttcggtagcaagatacatccaatatcgtgacataatttgtaatacagtttctcaatc 421
Query: 1249 t 1249
|
Sbjct: 422 t 422
Score = 733 bits (370), Expect = 0.0
Identities = 415/433 (95%), Gaps = 14/433 (3%)
Strand = Plus / Plus
Query: 1251 cttagaatattaatgtatgtacggtctacgtaatgttaaacaaatagtaatggtttttaa 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cttagaatattaatgtatgtacggtctacgtaatgttaaacaaatagtaatggtttttaa 517
Query: 1311 ctaacaagtcgagtcttatctcgtctgaaggttgaggaactgttttaaattatacttaaa 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ctaacaagtcgagtcttatctcgtctgaaggttgaggaactgttttaaattatacttaaa 577
Query: 1371 agtatataaagttgtgttgtaaatattcactcatatatatagctgtacggataacataat 1430
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 578 agtatataaagttgtgttgtaaatattcactcatacatatagctgtacggataacataat 637
Query: 1431 aagtataacttaatgcggccggcacaagtctggatgatctaatcacacgaaacaatagat 1490
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 638 aagtataacttaatgcggccggcacaagtctggatgatctaatcacatgaaacaatagat 697
Query: 1491 tcttaacatt--------------taaatttaatgtcgctgtatgttttgttgattcagc 1536
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 698 tcttaacatttaaattaatttcactaaatttaatgtcgctgtatgttttgttgattcagc 757
Query: 1537 atcacggttaatggtgctagaattacaagtagaagaacttttcagtacaaatttcttttg 1596
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 758 atcacgattaatggtgctagaattacaaatagaagaacttttcagtacaaatttcttttg 817
Query: 1597 catagaaattgtcattcatgaaaattataataattctatgacattaccacatccagggat 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 catagaaattgtcattcatgaaaattataataattctatgacattaccacatccagggat 877
Query: 1657 ttgacaccaggaa 1669
|||||||||||||
Sbjct: 878 ttgacaccaggaa 890
>BF14_2674_C1
Length = 758
Score = 468 bits (236), Expect = e-131
Identities = 239/240 (99%)
Strand = Plus / Minus
Query: 1 caccaaccagagaggtatatcaacaatataattagccttcaatagttgtaaattaaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 caccaaccagagaggtatatcaacaatataattagccttcaatagttgtaaattaaggaa 181
Query: 61 taaactagctaaaacccttaaaagcttaactcgaagcaccaatcgcaacttaaacaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 taaactagctaaaacccttaaaagcttaactcgaagcaccaatcgcaacttaaacaggtt 121
Query: 121 atgccttttaaaaccgtaaaattcattttatttaattatgaacaatacagcggttcgata 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgccttttaaaaccgtaaatttcattttatttaattatgaacaatacagcggttcgata 61
Query: 181 tataatatttaatcattattcatagaagtgattattaattaatgatagccgtgttgcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tataatatttaatcattattcatagaagtgattattaattaatgatagccgtgttgcaaa 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 201,332
Number of extensions: 3843
Number of successful extensions: 3843
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3843
Number of HSP's successfully gapped: 4
Length of query: 1669
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1652
Effective length of database: 8,119,229
Effective search space: 13412966308
Effective search space used: 13412966308
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)