BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08303 (UTR included)
(1561 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 147 6e-35
BF14_335_C2 139 2e-32
BF14_335_C4 115 2e-25
BF01049B1F01 109 1e-23
BF01016A2B02 100 1e-20
BF01014B2F02 100 1e-20
BF01044B1A07 92 3e-18
BF01045B1A06 92 3e-18
BF01056B2D01 86 2e-16
BF01016B1E06 84 8e-16
BF14_335_C5 80 1e-14
BF01044B2F11 70 1e-11
>BF01019A1H08
Length = 504
Score = 147 bits (74), Expect = 6e-35
Identities = 83/86 (96%)
Strand = Plus / Minus
Query: 1245 ttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacgc 1304
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgc 418
Query: 1305 ggtggacccggcacccgcatggtgaa 1330
| ||||||||||||||||| ||||||
Sbjct: 417 gatggacccggcacccgcacggtgaa 392
>BF14_335_C2
Length = 1827
Score = 139 bits (70), Expect = 2e-32
Identities = 82/86 (95%)
Strand = Plus / Minus
Query: 1245 ttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacgc 1304
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 921 ttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacgc 862
Query: 1305 ggtggacccggcacccgcatggtgaa 1330
|| |||||||||||||||| ||||||
Sbjct: 861 ggcggacccggcacccgcacggtgaa 836
>BF14_335_C4
Length = 1491
Score = 115 bits (58), Expect = 2e-25
Identities = 80/86 (93%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 1245 ttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacgc 1304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1252 ttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaacgc 1310
Query: 1305 ggtggacccggcacccgcatggtgaa 1330
| ||| ||| ||| ||||| ||||||
Sbjct: 1311 gatggtccccgcaaccgcacggtgaa 1336
>BF01049B1F01
Length = 840
Score = 109 bits (55), Expect = 1e-23
Identities = 55/55 (100%)
Strand = Plus / Minus
Query: 1249 acctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 1303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 acctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 587
>BF01016A2B02
Length = 780
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 1245 ttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacgc 1304
|||| |||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 282 ttaagcctacacctgagtcgcaattcccaggcactgttgaagctcctctcccttcaacgc 223
Query: 1305 ggtggacccggcac 1318
| |||||||||||
Sbjct: 222 gcgggacccggcac 209
>BF01014B2F02
Length = 623
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/77 (92%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 1252 tacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacgcggtggac 1311
|||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggac 566
Query: 1312 ccggcacccgcatggtg 1328
|||||||||||| ||||
Sbjct: 565 ccggcacccgcacggtg 549
>BF01044B1A07
Length = 806
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 1253 acacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacgcggtggacc 1312
|||||||| |||| |||||||| ||| |||||||||||||||||||| ||||| ||||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 1313 cggcacccgcatggtgaa 1330
|| |||||||| ||||||
Sbjct: 472 cgccacccgcacggtgaa 455
>BF01045B1A06
Length = 820
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 1265 caagtcccaggcactgttgaagctcctctccctgcaacgcggtggacccggcacccgcat 1324
||||||| |||||||||||||||||||||||||||||| | ||||||| ||||||||||
Sbjct: 748 caagtccaaggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgcat 689
Query: 1325 ggtgaa 1330
||||||
Sbjct: 688 ggtgaa 683
>BF01056B2D01
Length = 728
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 1268 gtcccaggcactgttgaagctcctctccctgcaacgcggtggacccggcacccgcatggt 1327
||||||||| |||||||||||||||||||||||| | | ||||||||||||||||| |||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 1328 gaa 1330
|||
Sbjct: 106 gaa 104
>BF01016B1E06
Length = 606
Score = 83.8 bits (42), Expect = 8e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 1245 ttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaac 1302
||||||||||||||||||||| | |||| ||||||||||||||||||||| |||||||
Sbjct: 250 ttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctctgcaac 193
>BF14_335_C5
Length = 1597
Score = 79.8 bits (40), Expect = 1e-14
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 1245 ttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacgc 1304
|||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 1500 ttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaa--a 1557
Query: 1305 ggtggacccggcacccgcatggtgaa 1330
| || |||||||||||||| ||||||
Sbjct: 1558 gatgcacccggcacccgcacggtgaa 1583
>BF01044B2F11
Length = 728
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 1245 ttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 1303
||||||||||||||| | |||||||||||| |||| |||||||||||||||||||||
Sbjct: 650 ttaaacctacacctgaattgcaagtcccaggtgctgtcgaagctcctctccctgcaacg 708
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 192,275
Number of extensions: 3796
Number of successful extensions: 3796
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 3793
Number of HSP's successfully gapped: 12
Length of query: 1561
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1544
Effective length of database: 8,119,229
Effective search space: 12536089576
Effective search space used: 12536089576
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)