BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08316 (UTR included)
(5749 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B2G06 1172 0.0
>BF01031B2G06
Length = 656
Score = 1172 bits (591), Expect = 0.0
Identities = 603/607 (99%)
Strand = Plus / Plus
Query: 4600 agtgcaccatgaacagcgacgacgtgaacagatccggcacgccacagaaagccgatagcg 4659
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 50 agtgcaccatgaacagcgacgacgtaaacagatccggcacgccacagaaagccgatagcg 109
Query: 4660 gctccggcgaattggacaatttgctagaaaatcctgaaatcgccggatccaaagacaaga 4719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gctccggcgaattggacaatttgctagaaaatcctgaaatcgccggatccaaagacaaga 169
Query: 4720 tggaggaagataaagacacattcttcatggcgaagacgacatacgacttcgagacttgca 4779
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tggaggaagataaagacacgttcttcatggcgaagacgacatacgacttcgagacttgca 229
Query: 4780 gcacgaacgccagcgagcagggcttcgaaaacgaaagcgacatatactgtccgaactacc 4839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gcacgaacgccagcgagcagggcttcgaaaacgaaagcgacatatactgtccgaactacc 289
Query: 4840 aaatgtctgaagtgagcatccggagtcacggcttgtacgcgccatcgccgtcatccatgt 4899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aaatgtctgaagtgagcatccggagtcacggcttgtacgcgccatcgccgtcatccatgt 349
Query: 4900 gccccaatgagataagcttcagcaacgaggacgtgtcaacgttagagagccagtacgtga 4959
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 350 gccccaacgagataagcttcagcaacgaggacgtgtcaacattagagagccagtacgtga 409
Query: 4960 actacgaccccggctggcggaaaacgataaagaacaatccgaaactaggcaaatacgtgc 5019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 actacgaccccggctggcggaaaacgataaagaacaatccgaaactaggcaaatacgtgc 469
Query: 5020 ccaccccggctctgagctgtccggaggtcaacagagacagtccgatatcgttcacgagtg 5079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ccaccccggctctgagctgtccggaggtcaacagagacagtccgatatcgttcacgagtg 529
Query: 5080 aattagacgaactttatactcaaataactagtagggataaagacaggacgcggaacaagg 5139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aattagacgaactttatactcaaataactagtagggataaagacaggacgcggaacaagg 589
Query: 5140 aacatggcttcgacgtcacggtcaacagtgacgtgaccttgaaacctgacagtgacagtt 5199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aacatggcttcgacgtcacggtcaacagtgacgtgaccttgaaacctgacagtgacagtt 649
Query: 5200 gtgtcag 5206
|||||||
Sbjct: 650 gtgtcag 656
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 509,378
Number of extensions: 8819
Number of successful extensions: 8819
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8819
Number of HSP's successfully gapped: 1
Length of query: 5749
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5731
Effective length of database: 8,109,745
Effective search space: 46476948595
Effective search space used: 46476948595
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)