BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08317 (UTR included)
(4294 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2G07 1497 0.0
>BF01056B2G07
Length = 783
Score = 1497 bits (755), Expect = 0.0
Identities = 776/783 (99%)
Strand = Plus / Plus
Query: 976 ctactactagatttgctgcacattcaaattcattcgcagtggccatgtgcaataagctgt 1035
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctactacaagatttgctgcccattcaaattcattcgcagtggccatgtgcaataagctgt 60
Query: 1036 cggacatggtcgagtgcgagagtacgggggttgagcggagagcaaaactcgtcagggcct 1095
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61 cggacatggtcgagtgcgagagtacgggggttgaacggagagcaaaactcgtcagggcct 120
Query: 1096 tacggacagtacatggcggagcggttcgtgctcaaggtgtcctgaagctgctaaggtccc 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacggacagtacatggcggagcggttcgtgctcaaggtgtcctgaagctgctaaggtccc 180
Query: 1156 tgctggagagattcccttcatccagctcagtccgagctgcaatcacagctctcactgcca 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgctggagagattcccttcatccagctcagtccgagctgcaatcacagctctcactgcca 240
Query: 1216 tcgctgcggatacagtagtgcatgtacccgatcaggtggagcttctgcttaaactggcgg 1275
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgctgcggatactgtagtgcatgtacccgatcaggtggagcttctgcttaaactggcgg 300
Query: 1276 ttaacgacgctcggtcagctgttcgccgcgctgcgctagtgggtcttcgtaaactggctg 1335
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttaacgacgctcggtcggctgttcgccgcgctgcgctagtgggtcttcgtaaactggctg 360
Query: 1336 agcatgctgcgctatggcccactgactgtatccaagacctggtgcacgcggcttcagaga 1395
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcatgctgcgctgtggcccactgactgtatccaagacctggtgcacgcggcttcagaga 420
Query: 1396 tgcaggacgatgagcatagcatgctctgcctacaggtcatgcagatcctggtccgttgcc 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 421 tgcaggacgatgagcatagcatgctctgcctacaggtcatgcagatcctggtccgctgcc 480
Query: 1456 cggcggtgtgcgcggcggccgggcccgaggcgtctctccggcgccactgcagcgctgcag 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggcggtgtgcgcggcggccgggcccgaggcgtctctccggcgccactgcagcgctgcag 540
Query: 1516 cgctcagcgtcaacatgaagctagctgcaatcgctgcagacgtactcacaagaatcgtag 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgctcagcgtcaacatgaagctagctgcaatcgctgcagacgtactcacaagaatcgtag 600
Query: 1576 cccactgctacgaggagaatctcccggtcgaaggttcggagctgatgctggccctggagt 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cccactgctacgaggagaatctcccggtcgaaggttcggagctgatgctggccctggagt 660
Query: 1636 cgctggtgatcgccaccggcatggacaacggacagaataatatacgacccctgcggatag 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgctggtgatcgccaccggcatggacaacggacagaataatatacgacccctgcggatag 720
Query: 1696 cgctcagatgtctggtacaattgagttcctccgcccctcacctgtacgcgagtcgaaccg 1755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgctcagatgtctggtacaattgagttcctccgcccctcacctgtacgcgagtcgaaccg 780
Query: 1756 ctg 1758
|||
Sbjct: 781 ctg 783
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 398,379
Number of extensions: 7670
Number of successful extensions: 7670
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7670
Number of HSP's successfully gapped: 1
Length of query: 4294
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4276
Effective length of database: 8,109,745
Effective search space: 34677269620
Effective search space used: 34677269620
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)