BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08320 (UTR included)
(2521 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050A2H05 1659 0.0
>BF01050A2H05
Length = 853
Score = 1659 bits (837), Expect = 0.0
Identities = 843/845 (99%)
Strand = Plus / Plus
Query: 1089 ttgtcatgtctgcttgttggctacctctgcactgtatatacagccgatgtagttgtcatg 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ttgtcatgtctgcttgttggctacctctgcactgtatatacagccgatgtagttgtcatg 68
Query: 1149 atatatggagctgtattgatgcagaattgctttttcctcgctgcgtatacgagacccgtg 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atatatggagctgtattgatgcagaattgctttttcctcgctgcgtatacgagacccgtg 128
Query: 1209 tatatagaaaaagttataaggtcgacctataatatgattcgagcagttgaagacgaggat 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tatatagaaaaagttataaggtcgacctataatatgattcgagcagttgaagacgaggat 188
Query: 1269 gatgtaattttttctaatcaaagtgctgatagatccaatcaaaggccgacaggaagtcct 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gatgtaattttttctaatcaaagtgctgatagatccaatcaaaggccgacaggaagtcct 248
Query: 1329 gatgcgagagtggcagcggtgtcatcagagaaccccgtgtccgttcaagacgaagatgca 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gatgcgagagtggcagcggtgtcatcagagaaccccgtgtccgttcaagacgaagatgca 308
Query: 1389 aatgacgtagtagtatttaaatctaacaaaaacgcaagagaaataatcgatccagaagta 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aatgacgtagtagtatttaaatctaacaaaaacgcaagagaaataatcgatccagaagta 368
Query: 1449 gagcaacgggaaaataacagagaaatgaggttctcgaccgatttcagtacaatgttcgaa 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gagcaacgggaaaataacagagaaatgaggttctcgaccgatttcagtacaatgttcgaa 428
Query: 1509 gcaccaagtcgattttcttccgattttggtaatttggacgtgacgagctacagtcgtatc 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gcaccaagtcgattttcttccgattttggtaatttggacgtgacgagctacagtcgtatc 488
Query: 1569 aacggatatcaggagttggagaatattgatagagagcaccacccgcagccgttatacaga 1628
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 489 aacggatatcaggagttggagaatattgatagggagcaccacccgcagccgttatacaga 548
Query: 1629 gaaacaactgtgaatgctccttccaacagtttggtgttcacatcagacgttactccggga 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gaaacaactgtgaatgctccttccaacagtttggtgttcacatcagacgttactccggga 608
Query: 1689 acagctagacgaactgcctccttgaagaagaatttcataaccgttgttaacatgttgctc 1748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 acagctagacgaactgcctccttgaagaagaatttcataaccgttgttaacatgttgctc 668
Query: 1749 gatttcaatttctatttgtacacactgttacatctgtgcacgacattctcaattctaatt 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gatttcaatttctatttgtacacactgttacatctgtgcacgacattctcaattctaatt 728
Query: 1809 ctcgggttgctcttcccgcccatgctatgggaactcaatccgagtatgaatatatggtcg 1868
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ctcgggttgctcttcccgccgatgctatgggaactcaatccgagtatgaatatatggtcg 788
Query: 1869 gtgtcggtgtcgtcagctgtagcgtacagtggcgcgttttgtttcatcattctgatcatc 1928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 gtgtcggtgtcgtcagctgtagcgtacagtggcgcgttttgtttcatcattctgatcatc 848
Query: 1929 gcgct 1933
|||||
Sbjct: 849 gcgct 853
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 295,017
Number of extensions: 5969
Number of successful extensions: 5969
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5969
Number of HSP's successfully gapped: 1
Length of query: 2521
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2504
Effective length of database: 8,119,229
Effective search space: 20330549416
Effective search space used: 20330549416
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)