BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08329 (UTR included)
(1597 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B1F03 731 0.0
>BF01031B1F03
Length = 671
Score = 731 bits (369), Expect = 0.0
Identities = 383/389 (98%)
Strand = Plus / Plus
Query: 562 agcatatcaaaaggacaggatgggtgatatgtgatatagaaaactgtgagaccatagctg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agcatatcaaaaggacaggatgggtgatatgtgatatagaaaactgtgagaccatagctg 342
Query: 622 gtcatatgtaccgcatgggcctcatgaccttcctactgacagaaaaaaataatccaacta 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gtcatatgtaccgcatgggcctcatgaccttcctactgacagaaaaaaataatccaacta 402
Query: 682 aacttgatcgattcaaatgtttacaaattgcattaatacatgacttagcagaatgtattg 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aacttgatcgattcaaatgtttacaaattgcattaatacatgacttagcagaatgtattg 462
Query: 742 tgggcgatttaactccacactgtggtgtaacaccagaagagaaacatagacgagaggatg 801
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 463 tgggcgatttaactccacactgtggtgtaacaccagaagagaaacatagaagagaggatg 522
Query: 802 aggcgatgaagacaattgctgaactcaccggtttggctggagacagaatgtatgaaatat 861
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 523 aggcgatgaagacaattgctgaactcaccggtttggctggagacagaatgtatnnnntat 582
Query: 862 ataaagagtatgaaaaccaaagttcaccggaagcaaagttcgccaaagatctggatcgtt 921
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 583 ataaagagtatgaaaaccaaagttcaccggaagcaaagttcgccaaagatttggatcgtt 642
Query: 922 atgacatgattttgcaagcatttgaatat 950
|||||||||||||||||||||||||||||
Sbjct: 643 atgacatgattttgcaagcatttgaatat 671
Score = 400 bits (202), Expect = e-111
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 362 ctaataaaaacgaagtctaggttggattgctttagtcaaaaaaataagaacaaagtgata 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaataaaaacgaagtctaggttggattgctttagtcaaaaaaataagaacaaagtgata 60
Query: 422 agttttacatcgttcttaattaagaactgaaaatatcaaatttgtgaaaatttgccagca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttttacatcgttcttaattaagaactgaaaatatcaaatttgtgaaaatttgccagca 120
Query: 482 acaacgaaaataaaataacatggatttaggtctagaaaacaaaaaaatacttgaattttt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaacgaaaataaaataacatggatttaggtctagaaaacaaaaaaatacttgaattttt 180
Query: 542 ggagttagtcgggcgccttaag 563
||||||||||||||||||||||
Sbjct: 181 ggagttagtcgggcgccttaag 202
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 268,479
Number of extensions: 6530
Number of successful extensions: 6530
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6530
Number of HSP's successfully gapped: 2
Length of query: 1597
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1580
Effective length of database: 8,119,229
Effective search space: 12828381820
Effective search space used: 12828381820
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)