BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08347 (UTR included)
(2515 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A2F06 1505 0.0
>BF01013A2F06
Length = 815
Score = 1505 bits (759), Expect = 0.0
Identities = 801/815 (98%), Gaps = 1/815 (0%)
Strand = Plus / Plus
Query: 306 cagttcagtcagaatgtgaaatgagttagacgtgttttaagtttgttaaaa-cagtaata 364
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 cagttcagtcagaatgtgaaatgagttagacgtgttttaagtttgttaaaaacagtaata 60
Query: 365 tataataatgaataattaagtattaatgaagtttataaaaaataagacgaagcaaagatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 tataataatgaataattaagtattaatgaagtttataaaaaataagacgaagcaacgatt 120
Query: 425 cgcatcaataaattaattaattgaataatgtacaaacaattatattataataacattgaa 484
| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 121 cacatcaataaattaattaactgaataatgtacaaacaattatattacaataacattgag 180
Query: 485 atataagtcgtatgaaatggataggaaccgtggtgatatggaaatgagtgatggtgtgaa 544
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 181 atataagtcgtatgaaatggataggaatcgtggtgatatggaaatgagtgatggtgtgaa 240
Query: 545 ggaggttgtgtacggatacgaggaggcgttggaattgacaggtcatgggagatacaacgt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaggttgtgtacggatacgaggaggcgttggaattgacaggtcatgggagatacaacgt 300
Query: 605 tggactgttgtttgcgtgtttcatggtgatcgtggcgatgggtatcgacatctttggact 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggactgttgtttgcgtgtttcatggtgatcgtggcgatgggtatcgacatctttggact 360
Query: 665 cggcatcatcgttacagcggccacctgtgacctggggatgaatttgcagcagattggagt 724
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 361 cggcatcatcgttacagcggccacctgcgacctggggatgaatttgcagcagattggagt 420
Query: 725 gctctcgtctatgccatttgctggtataatcgtcatgtcatatccatggggttacctctc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctctcgtctatgccatttgctggtataatcgtcatgtcatatccatggggttacctctc 480
Query: 785 cgacactcgcggcaggcgactggtgttgttgtgggcgatggggggtagtttcgtgagtgc 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 481 cgacactcgcggcaggcgactggtgttgttgtgggcgatggggggtagtttcgtgagcgc 540
Query: 845 tatgctcagtagtttggcgcccacgtggcaggtgctggcggccttgaggtttattagttc 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatgctcagtagtttggcgcccacgtggcaggtgctggcggccttgaggtttattagttc 600
Query: 905 tgcattgtcgagtgccgcagagtcagcgacatatgcgttacttggcgagtgctgcacgtc 964
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgcattgtcgagtgcggcagagtcagcgacatatgcgttacttggcgagtgctgcacgtc 660
Query: 965 ccagcaccgagcgagatacatgctgctcatgaccagcgcgctcatgctgacacccactct 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccagcaccgagcgagatacatgctgctcatgaccagcgcgctcatgctgacacccactct 720
Query: 1025 ctattatgtatggggatacttcataacgaaattgaattttacattctacatcctgggcat 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 721 ctattatgtatggggatacttcataacgaaattgaattttacattctacatccnnnncat 780
Query: 1085 cgcgtaccgtccttggcgtcttctgaccatggtga 1119
|||||||||||||||||||||||||||||||||||
Sbjct: 781 cgcgtaccgtccttggcgtcttctgaccatggtga 815
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 270,541
Number of extensions: 5614
Number of successful extensions: 5614
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5613
Number of HSP's successfully gapped: 1
Length of query: 2515
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2498
Effective length of database: 8,119,229
Effective search space: 20281834042
Effective search space used: 20281834042
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)