BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08374 (UTR included)
(3622 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B2D06 1021 0.0
BF01053B2G04 1019 0.0
BF14_1138_C1 1011 0.0
BF14_1869_C1 78 1e-13
>BF01031B2D06
Length = 749
Score = 1021 bits (515), Expect = 0.0
Identities = 539/547 (98%)
Strand = Plus / Plus
Query: 929 ggcgacccaggcggaactggcgcgcgaaccggccccagccctacacgcggacctgttgga 988
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggcgacccatgcggaactggcgcgcgaaccggccccagccctacacgcggacctgctgga 60
Query: 989 actgttccgggagaggtggtggtgtgacgtggaactggtcgggaaggggttcgcgctccc 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgttccgggagaggtggtggtgtgacgtggaactggtcgggaaggggttcgcgctccc 120
Query: 1049 agcacatagagtcatactagctgccaggtgttcatacttcagggagctgctgatgagata 1108
||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 121 agcacatagagtcattctagctgccagatgttcatacttcagagagctgctgatgagata 180
Query: 1109 tcccaattcgtgtcgtgtgccgctggagggcgctggtgggtccctgccgcgggaggagct 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcccaattcgtgtcgtgtgccgctggagggcgctggtgggtccctgccgcgggaggagct 240
Query: 1169 ggaggcggccgtggtagccatgtacgcggggcccgccgcgctcaggagcggcgccagatg 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaggcggccgtggtagccatgtacgcggggcccgccgcgctcaggagcggcgccagatg 300
Query: 1229 tgacgcatgctgcaagtgggagcgaggctcggaggcggagcttgacatcatcagcgtgga 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgacgcatgctgcaagtgggagcgaggctcggaggcggagcttgacatcatcagcgtgga 360
Query: 1289 gaactcaaccatccggaggtgtacctgcgggcgcggcaggcgtatggagccctcgagact 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaactcaaccatccggaggtgtacctgcgggcgcggcaggcgtatggagccctcgagact 420
Query: 1349 ccgccggctggccgacctgctgggcttcactccggaaggactgcacagagatatgaagta 1408
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 421 ccgccggctggccgacctgctgggcttcactccagaaggactgcacagagatatgaagta 480
Query: 1409 tctcctggactcgggtgagttgtgtgacgctcgtctgtcgtggtcggtggagggtgaggg 1468
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 481 tctcctggactcgggtgagctgtgtgacgctcgtctatcgtggtcggtggagggtgaggg 540
Query: 1469 tgcggac 1475
|||||||
Sbjct: 541 tgcggac 547
Score = 242 bits (122), Expect = 3e-63
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 3474 agacagtcggagcacccaactgactggagccctggatcataagcaagtgttgtccgggga 3533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 agacagtcggagcacccaactgactggagccctggatcataagcaagtgttgtccgggga 687
Query: 3534 acgacacacagatctctataatgtatataaagattgtattatatatgtaaattaatgttt 3593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 acgacacacagatctctataatgtatataaagattgtattatatatgtaaattaatgttt 747
Query: 3594 tt 3595
||
Sbjct: 748 tt 749
Score = 172 bits (87), Expect = 3e-42
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 3044 cggacagagggactatcgtgccgagggcgcatatagtcgtagcccgcgaagcagaggaca 3103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cggacagagggactatcgtgccgagggcgcatatagtcgtagcccgcgaagcagaggaca 602
Query: 3104 cagccccgcgtacacgtgagacgtgag 3130
|||||||||||||||||||||||||||
Sbjct: 603 cagccccgcgtacacgtgagacgtgag 629
>BF01053B2G04
Length = 526
Score = 1019 bits (514), Expect = 0.0
Identities = 523/526 (99%)
Strand = Plus / Plus
Query: 1490 cgacgcggagggtgacgggggtgcgtacggcttcaggagtgctatggagctgccctgcca 1549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgacgcggagggtgacgggggtgcgtacggcttcaggagtgctatggagctgccctgcca 60
Query: 1550 caggctggtgctggctgccaggtctagattcttcaggagtgtgatgtctcggcgcggagc 1609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caggctggtgctggctgccaggtctagattcttcaggagtgtgatgtctcggcgcggagc 120
Query: 1610 gtgttcaggcaccgtgtgtgttgatgagcgtgtgctgccgaggagattcgcccgggcgct 1669
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 gtgttcaggcaccgtgtgtgttgatgagcgagtgctgccgaggagattcgcccgggcgct 180
Query: 1670 gctgcacgcggcctacacggaccaggtggacctctctctgatatcaaagagcagttccaa 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctgcacgcggcctacacggaccaggtggacctctctctgatatcaaagagcagttccaa 240
Query: 1730 cgcagcctccggctcggggacgctacgcggttctcgtggcagtttagaagatgcgttccg 1789
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcagcctccggctcggggacgctacgcggttctcgtggcagtttagaagatgcgttccg 300
Query: 1790 tttgtacgagctggccaggttccttgagatgccgatagctgctcagggttgtgaagatgc 1849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttgtacgagctggccaggttccttgagatgccgatagctgctcagggttgtgaagatgc 360
Query: 1850 tctggtccgagcgctgtgtgcggacacactaccagccattatacggtggagtggagccaa 1909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctggtccgagcgctgtgtgcggacacactaccagccattatacggtggagtggagccaa 420
Query: 1910 acacgcctccgcatgggtccatcggcaagcgacccgctacctccgagatgagttcccagc 1969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acacgcctccgcatgggtccatcggcaagcgacccgctacctccgagatgagttcccagc 480
Query: 1970 tatcatgtctcactcgggctccggtcgtgtccctcgggctgcgctg 2015
|||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 tatcatgtctcactcgggttccggtcgtgtccctcgggctgcgctg 526
>BF14_1138_C1
Length = 815
Score = 1011 bits (510), Expect = 0.0
Identities = 534/543 (98%), Gaps = 6/543 (1%)
Strand = Plus / Plus
Query: 543 gacgggcgcgtgctggccgatcggtgcggtgatgtcttccgtccgatgagccggctcctc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gacgggcgcgtgctggccgatcggtgcggtgatgtcttccgtccgatgagccggctcctc 338
Query: 603 tgttgtctgctcgtccgccgccccgacatgggcgctgcgctgtcgcacccccaggagggc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tgttgtctgctcgtccgccgccccgacatgggcgctgcgctgtcgcacccccaggagggc 398
Query: 663 gaggcatgtgacgccggcgtaccgccctccccacccaccatggctgacgtcatcagggag 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gaggcatgtgacgccggcgtaccgccctccccacccaccatggctgacgtcatcagggag 458
Query: 723 cgcaagaagaaagctggtggggctggtctggggacgttgcggaggaggttggcggcggcg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cgcaagaagaaagctggtggggctggtctggggacgttgcggaggaggttggcggcggcg 518
Query: 783 acacgcagaccgagggactcgaggcctgatagaggtactggttgcgaacacgctcgcttc 842
||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 519 acacgcagaccgagggactcgaggcctgataga------ggttgcgaacacgctcgcttc 572
Query: 843 atccgctccgtggtgtccacctggaggttgtcggaggttttccttctgcgcgaagaactg 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 atccgctccgtggtgtccacctggaggttgtcggaggttttccttctgcgcgaagaactg 632
Query: 903 gaagcgggcgctgcgttacgagacctggcgacccaggcggaactggcgcgcgaaccggcc 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gaagcgggcgctgcgttacgagacctggcgacccaggcggaactggcgcgcgaaccggcc 692
Query: 963 ccagccctacacgcggacctgttggaactgttccgggagaggtggtggtgtgacgtggaa 1022
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 693 ccagccctacacgcggacctgctggaactgttccgggnnaggtggtggtgtgacgtggaa 752
Query: 1023 ctggtcgggaaggggttcgcgctcccagcacatagagtcatactagctgccaggtgttca 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ctggtcgggaaggggttcgcgctcccagcacatagagtcatactagctgccaggtgttca 812
Query: 1083 tac 1085
|||
Sbjct: 813 tac 815
>BF14_1869_C1
Length = 761
Score = 77.8 bits (39), Expect = 1e-13
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 41 atctggtaatttttggcctctagggtggaatagagttggcccggtcagttagacatatgt 100
||||||| |||| ||||||||||| ||||| |||||| ||||||||| || | ||||||
Sbjct: 554 atctggttatttatggcctctaggttggaaaagagttctcccggtcagctataaatatgt 495
Query: 101 tactaatgccgaaattaaagcggacgaggtcgcgg 135
|||||| |||||||||| || ||||| |||||||
Sbjct: 494 tactaacaccgaaattaacgcagacgaagtcgcgg 460
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 345,710
Number of extensions: 7914
Number of successful extensions: 7914
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 7914
Number of HSP's successfully gapped: 7
Length of query: 3622
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3604
Effective length of database: 8,109,745
Effective search space: 29227520980
Effective search space used: 29227520980
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)