BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08375 (UTR included)
(1798 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3281_C1 882 0.0
>BF14_3281_C1
Length = 1095
Score = 882 bits (445), Expect = 0.0
Identities = 448/449 (99%)
Strand = Plus / Plus
Query: 451 ataaggtccattttgtatttgttatacgaagtaatctgtgggagtgtatcatgttttact 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaggtccattttgtatttgttatacgaagtaatctgtgggagtgtatcatgttttact 60
Query: 511 gttcctatgttagtatacactatattatctgtgaatgcggcgatactttcccaacggaag 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttcctatgttagtatacactatattatctgtgaatgcggcgatactttcccaacggaag 120
Query: 571 atgaattgaaggagcatcttaaaacagaacacaataataaattgaggatagaaagaaacg 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgaattgaaggagcatcttaaaacagaacacaataataaattgaggatagaaagaaacg 180
Query: 631 aatatagatgtgacacgtgcgacaagatcttcggcagtgagaaggcctgtctgattcacc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatatagatgtgacacgtgcgacaagatcttcggcagtgagaaggcctgtctgattcacc 240
Query: 691 agcgagtccacacgaaccctcgacttcgacgtgaccgcgaactcgacaagaaaaaatatt 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcgagtccacacgaaccctcgacttcgacgtgaccgcgaactcgacaagaaaaaatatt 300
Query: 751 atacactcaagaatatcgtctgtgaagtgtgcggcaaacaatatgcttcgaacgctgctc 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atacactcaagaatatcgtctgtgaagtgtgcggcaaacaatatgcttcgaacgctgctc 360
Query: 811 tgcgctaccaccagcgagtccacaccggggagagaccataccgctgctccatgtgtccga 870
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 tgcgctaccaccagcgagtccacaccggggagagaccataccgctgctccatgtgtccca 420
Query: 871 aaagtttcactatgcccctgttcctacag 899
|||||||||||||||||||||||||||||
Sbjct: 421 aaagtttcactatgcccctgttcctacag 449
Score = 67.9 bits (34), Expect = 5e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 934 cagattcatactcgaactcacacaggggagagac 967
||||||||||||||||||||||||||||||||||
Sbjct: 447 cagattcatactcgaactcacacaggggagagac 480
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 203,902
Number of extensions: 4185
Number of successful extensions: 4185
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4183
Number of HSP's successfully gapped: 2
Length of query: 1798
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1781
Effective length of database: 8,119,229
Effective search space: 14460346849
Effective search space used: 14460346849
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)