BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08381 (UTR included)
(2875 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A2D06 926 0.0
>BF01033A2D06
Length = 771
Score = 926 bits (467), Expect = 0.0
Identities = 499/507 (98%), Gaps = 7/507 (1%)
Strand = Plus / Plus
Query: 2375 ataataccgccccacccaccacccaccacctacaataacaatcaacaataggatggtcat 2434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataataccgccccacccaccacccaccacctacaataacaatcaacaataggatggtcat 60
Query: 2435 aaattgagactgcatcttgacaaaattatatataattttttcaacacaaccatttgatat 2494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaattgagactgcatcttgacaaaattatatataattttttcaacacaaccatttgatat 120
Query: 2495 ggcagctttatttattatacaattaatgatcattagtaatgtttgctttaatagaacttg 2554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcagctttatttattatacaattaatgatcattagtaatgtttgctttaatagaacttg 180
Query: 2555 ccgcttacattttgtttagttttaattatttacttttttaactattaggttagtcgactt 2614
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgcttacattttgtttaattttaattatttacttttttaactattaggttagtcgactt 240
Query: 2615 gaacagagtttaatggaaacgaaatcgtgtaaatatacctatatatcta----tatatat 2670
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 gaacagagtttaatggaaacgaaatcgtgtaaatatacctatatatctatatctatatat 300
Query: 2671 aaaata--ccctctatatattatatgatagagatgtccaataaaacgatacaatctagac 2728
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaatattccctctatatattatatgatagagatgtccaataaaacgatacaatctagac 360
Query: 2729 cgtgcgttctgattgtaaaatttatataaagctttcatataacatacaccctgtattcta 2788
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtgcgttctgattgt-aaatttatataaagctttcatataacatacaccctgtattcta 419
Query: 2789 aagacatacagactaatattaagacttatttacatagatagaaatataatttagaattga 2848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aagacatacagactaatattaagacttatttacatagatagaaatataatttagaattga 479
Query: 2849 attatgctcagtataatatttatatat 2875
|||||||||||||||||||||||||||
Sbjct: 480 attatgctcagtataatatttatatat 506
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 313,156
Number of extensions: 7091
Number of successful extensions: 7091
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7086
Number of HSP's successfully gapped: 1
Length of query: 2875
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2858
Effective length of database: 8,119,229
Effective search space: 23204756482
Effective search space used: 23204756482
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)