BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08388 (UTR included)
(1810 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B2D11 696 0.0
>BF01023B2D11
Length = 784
Score = 696 bits (351), Expect = 0.0
Identities = 380/387 (98%), Gaps = 2/387 (0%)
Strand = Plus / Plus
Query: 1424 tatattctattttcgtttagtcagatatgctaagcattttattataatttaagttaaact 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatattctattttcgtttagtcagatatgctaagcattttattataatttaagttaaact 60
Query: 1484 taaatggcaccaccaatttatttatttaagttaatgtggtaacatatttttgttttataa 1543
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 61 taaatggcaccaccaatttatttatgtaagttaatgtggtaacatatttttgttt-ataa 119
Query: 1544 ctccctaaaaatttttacaacctgaggctgccaattttggacaagactttgtaggatttg 1603
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ctccctaaaaattttgacaacctgaggctgccaattttggacaagactttgtaggatttg 179
Query: 1604 tgtattaacctaggataatcaatgaattttaacaggacttttaggaacagaggtgtctgt 1663
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 180 tgtattaacctaggataatcaatgaattttaacaggacttttaggaacagatgtgtctgt 239
Query: 1664 tgtttgcgatatgatatatttaaaataatttgtgttccattgtaagagtaagtcctcttc 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgtttgcgatatgatatatttaaaataatttgtgttccattgtaagagtaagtcctcttc 299
Query: 1724 aagaattaaaagtcccagtgtcagaatacagtatagatctgaaaaaatatgtaatgaccc 1783
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 300 aagaatt-aaagtcccagtgtcagaatacaatatagatctgaaaaaatatgtaatgaccc 358
Query: 1784 ttttacactacccatgctataggcaaa 1810
||||||||||||||||||||||||||
Sbjct: 359 atttacactacccatgctataggcaaa 385
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,571
Number of extensions: 6063
Number of successful extensions: 6063
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6061
Number of HSP's successfully gapped: 1
Length of query: 1810
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1793
Effective length of database: 8,119,229
Effective search space: 14557777597
Effective search space used: 14557777597
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)