BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08404 (UTR included)
(2380 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B2H09 1471 0.0
BF01038A1F09 105 3e-22
>BF01062B2H09
Length = 770
Score = 1471 bits (742), Expect = 0.0
Identities = 763/770 (99%)
Strand = Plus / Plus
Query: 378 aagcttaatattcgctttttagcgatggcgatgcggcacttaattgaataatagcaatga 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagcttaatattcgctttttagcgatggcgatgcggcacttaattgaataatagcaatga 60
Query: 438 aatataaataaagctgtatgctgaatgtaactgtgcctacaatgtatttaatttagaagg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatataaataaagctgtatgctgaatgtaactgtgcctacaatgtatttaatttagaagg 120
Query: 498 aaaatgaacgatagcgtagcagaatgtacagaaactctagatcctcgagtgcagatcgag 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaatgaacgatagcgtagcagaatgtacagaaactctagatcctcgagtgcagatcgag 180
Query: 558 ttagaacgcctgaacacagcaacagatgagattaataggcttgaggtagaattagatgaa 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttagaacgcctgaacacagcaacagatgagattaataggcttgaggtagaattagatgaa 240
Query: 618 gcccgcctggctttccgccgtcttcttgccgagggacatttaaggatacaacagcttact 677
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcccgcctggcttttcgccgtcttcttgccgagggacatttaaggatacaacagcttact 300
Query: 678 aagaagcttggaactagcgtgcacaaagccagaccgtactatgaagctagattcagagct 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaagcttggaactagcgtgcacaaagccagaccgtactatgaagctagattcagagct 360
Query: 738 aatattacctcccaggagttgcataccgctaacctggcttatgacaaagcgaatagtgcg 797
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatattacctcccaggagttgcacaccgctaacctggcttatgacaaagcgaatagtgcg 420
Query: 798 catgctgctgctagggaaatggtgtatctggcggagcaaggtttggccagactggccgat 857
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 421 catgctgctgctagggaaatggtgtatctggcggagcaaggtctggccagactggccgat 480
Query: 858 ggctccgggggattcaccttggaccccgcatggcaggaaatgcttaaccacgcaacacat 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggctccgggggattcaccttggaccccgcatggcaggaaatgcttaaccacgcaacacat 540
Query: 918 agagtcaaccaagcggaagcggacagggcgtcagcgacggtgacgcagcggactaaagcg 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agagtcaaccaagcggaagcggacagggcgtcagcgacggtgacgcagcggactaaagcg 600
Query: 978 ggttcacaccgggcggccacggcactagtgcagcaattgcagaacggacttaagagacat 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggttcacaccgggcggccacggcactagtgcagcaattgcagaacggacttaagagacat 660
Query: 1038 atcgctaagtcacggccctactttgaagagaaggctcgtatcaattcatcgctggagagt 1097
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 661 atcgctaagtcacggccctactttgaggagaaggctcgtatcaattcgtcgctggagagt 720
Query: 1098 cagaaggctagaatacagagtctagaacaacaagtgtgcgaagccaaaca 1147
||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 721 cagaaggctaggatacagaatctagaacaacaagtgtgcgaagccaaaca 770
>BF01038A1F09
Length = 806
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 1 actttctaccccttacaacagttcgacttccctcaaaagtcacaacttacact 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 actttctaccccttacaacagttcgacttccctcaaaagtcacaacttacact 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,273
Number of extensions: 4486
Number of successful extensions: 4486
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4486
Number of HSP's successfully gapped: 2
Length of query: 2380
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2363
Effective length of database: 8,119,229
Effective search space: 19185738127
Effective search space used: 19185738127
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)