BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08405 (UTR included)
(4312 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058A1B06 912 0.0
>BF01058A1B06
Length = 790
Score = 912 bits (460), Expect = 0.0
Identities = 478/484 (98%)
Strand = Plus / Plus
Query: 1907 ggaaaatgaagtcataagtaaaaagtgtgaattggaagaaagcaatcatgaagaggcttc 1966
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaaaatgaagttttaagtaaaaagtgtgaattggaagaaagcaatcatgaagaggcttc 60
Query: 1967 tataatatgtgttgagaaatctattgctgatgttatttcacttgattcaagcttaggaga 2026
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 tataatatgtgttgagaaatctgttgctgatgttatttcacttgattcaagcttaggaga 120
Query: 2027 agcggaaacagataacgatgaagttaaagttgaacctgcgaaagataatattaaattaga 2086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcggaaacagataacgatgaagttaaagttgaacctgcgaaagataatattaaattaga 180
Query: 2087 aagttcaagctccagtgaggatgacttcgaagatgtttctgatgaagagaccgagtctaa 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagttcaagctccagtgaggatgacttcgaagatgtttctgatgaagagaccgagtctaa 240
Query: 2147 gaaaccagttgttacattaaccctcaatatgggcaatacgatcgaagatgatatatttgc 2206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaaccagttgttacattaaccctcaatatgggcaatacgatcgaagatgatatatttgc 300
Query: 2207 cgatatatttgaaagtaaagctggtgaaaaatgtttagcacctaatataaaggaagagca 2266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgatatatttgaaagtaaagctggtgaaaaatgtttagcacctaatataaaggaagagca 360
Query: 2267 agaaataaaggaagatgttagcaaacacgagaacgaagtgaaagatataattaaatcaaa 2326
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 361 agaaataaaggaagatgttagcaaaaacgagaacgaagttaaagatataattaaatcaaa 420
Query: 2327 tgtcacagctgaagttgaaacaacttcaaaaagtatagaaacaacttcaaaaaatataga 2386
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 421 tgtcacagctgaagttgaaacaacttcaaaaagtatagaaacaacttcaaaaagtataga 480
Query: 2387 aaca 2390
||||
Sbjct: 481 aaca 484
Score = 458 bits (231), Expect = e-128
Identities = 276/291 (94%)
Strand = Plus / Plus
Query: 2343 gaaacaacttcaaaaagtatagaaacaacttcaaaaaatatagaaacatgcttgaatgaa 2402
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 500 gaaacaactccaaaaagtatagaaacaacttcaaaaagtatagaaacatgcttgaatgaa 559
Query: 2403 gaaagtgaaaaacagagaaatgaagatcaaaaagatgtagtggatagagaccaaacagta 2462
||||||||||||||||| |||||| | ||||||||| |||| || |||||||||||||||
Sbjct: 560 gaaagtgaaaaacagaggaatgaaaagcaaaaagatatagtcgacagagaccaaacagta 619
Query: 2463 tcagaggagcttgctacaacacaaaaggcagtgataccagaaagacaaaaaatatcagct 2522
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 620 tcagaggagcttgctacaacacaaaaggcaaaaataccagaaagacaaaaaatatcagct 679
Query: 2523 gaagaacttaacactatggtaacggaaattgagaatgaggaacagttactgcttcaagaa 2582
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 680 gaagaacttaacactatggtaacggaaattgagaatgaggaacagttattgcttcaggaa 739
Query: 2583 aagggcaaattagatcgtattggtcgcaacataactgaacagatgaccaaa 2633
|||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aagggcaagttggatcgtattggtcgcaacataactgaacagatgaccaaa 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 485,799
Number of extensions: 8946
Number of successful extensions: 8946
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8944
Number of HSP's successfully gapped: 4
Length of query: 4312
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4294
Effective length of database: 8,109,745
Effective search space: 34823245030
Effective search space used: 34823245030
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)