BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08406 (UTR included)
(1315 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_274_C1 1586 0.0
>BF14_274_C1
Length = 1567
Score = 1586 bits (800), Expect = 0.0
Identities = 823/828 (99%), Gaps = 2/828 (0%)
Strand = Plus / Plus
Query: 470 ccagatgtactacatgttcggtttcctgttcctggtgttcgtgatactggtgatcacgtg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ccagatgtactacatgttcggtttcctgttcctggtgttcgtgatactggtgatcacgtg 510
Query: 530 ttccgagaccaccatcctcctgtgctacttccacctctgcgccgaggactaccactggtg 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttccgagaccaccatcctcctgtgctacttccacctctgcgccgaggactaccactggtg 570
Query: 590 gtggcgagggttcctcagctcgggatccacggccggctacctcttcatctactgctgcca 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gtggcgagggttcctcagctcgggatccacggccggctacctcttcatctactgctgcca 630
Query: 650 ttacttcgtcaccaaactcaacatagacgacgccgcctccaccttcctctacttcggcta 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttacttcgtcaccaaactcaacatagacgacgccgcctccaccttcctctacttcggcta 690
Query: 710 caccctcataatggtcttcttgttcttcctcctcacggggaccattggcttcatggcgtg 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 caccctcataatggtcttcttgttcttcctcctcacggggaccattggcttcatggcgtg 750
Query: 770 cttttggttcgtcaggaagatctacagtgtcgttaaagttgattaagtcctttgagtagc 829
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 751 cttttggttcgtcaggaagatctacagtgtcgttaaagttgattaagtcatttgagtagc 810
Query: 830 cgcggcggcgcacggtgtaatatagattgtccttatatatgtatcgctctaaattgaata 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 cgcggcggcgcacggtgtaatatagattgtccttatatatgtatcgctctaaattgaata 870
Query: 890 ttatttttatattgtccgtttgtttcgattgagactacataaccataggctatgtgaaat 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 ttatttttatattgtccgtttgtttcgattgagactacataaccataggctatgtgaaat 930
Query: 950 cgttcgatgtctagttgctgctgtacgcgacacgatcgttgtataaatatttaactataa 1009
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 931 cgttcgatgtctagttgctgctgtacgcgacacg-tcgttgtataaatatttaactataa 989
Query: 1010 ataaatttataacatttatgcccatttattttatttatttg-ttaggttgtgtatacact 1068
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 990 ataaatttataacattaatgcccatttattttatttatttgtttaggttgtgtatacact 1049
Query: 1069 gtagagcgctacaggcacgacttttaactaccgaaggttacatcagagaacgtctttagt 1128
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1050 gtagagcgctacaggcacgacttttaactaccgaaggttacaccagagaacgtctttagt 1109
Query: 1129 ttgatgttgttgcataatcatattgtgtattacagaagtatagtattagtgtgatacaga 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 ttgatgttgttgcataatcatattgtgtattacagaagtatagtattagtgtgatacaga 1169
Query: 1189 aatgagagtgttgtttttactaggagatttacggttttttaagggcttactgggattcat 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 aatgagagtgttgtttttactaggagatttacggttttttaagggcttactgggattcat 1229
Query: 1249 tgtaaataatactgagatggatcttatcgtttagtgtactgtatatgg 1296
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 tgtaaataatactgagatggatcttatcgtttagtgtactgtatatgg 1277
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 188,696
Number of extensions: 4804
Number of successful extensions: 4804
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4802
Number of HSP's successfully gapped: 1
Length of query: 1315
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1298
Effective length of database: 8,119,229
Effective search space: 10538759242
Effective search space used: 10538759242
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)