BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08409 (UTR included)
(3235 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B1D04 1449 0.0
>BF01060B1D04
Length = 756
Score = 1449 bits (731), Expect = 0.0
Identities = 749/756 (99%)
Strand = Plus / Plus
Query: 1833 gtctcaatgtccataaaacccaagaataataaggatagagataatttctctaaagccgtt 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctcaatgtccataaaacccaagaataataaggatagagataatttctctaaagccgtt 60
Query: 1893 gcaagattcaccaaagaggatccgaccttccacttccggtacgacagcgataacaaagaa 1952
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 gcaagattcaccaaagaggatccgacctttcacttccggtacgacagcgataacaaagaa 120
Query: 1953 acagtcgtttccggtatgggagaacttcatcttgagatttatgcacagagaatggaaaga 2012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acagtcgtttccggtatgggagaacttcatcttgagatttatgcacagagaatggaaaga 180
Query: 2013 gaatatggctgtccggtggagcttgggaaaccaaaggttgcattcagagagacgatgatg 2072
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaatacggctgtccggtggagcttgggaaaccaaaggttgcattcagagagacgatgatg 240
Query: 2073 tcgccgtgcgagtttgattatcttcacaaaaagcagtccggcggcgcgggacaattcgcg 2132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgccgtgcgagtttgattatcttcacaaaaagcagtccggcggcgcgggacaattcgcg 300
Query: 2133 aaggtcaccggcatcatggaaccactgccgccacatcaaaacacgctgttagagttcgtg 2192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggtcaccggcatcatggaaccactgccgccacatcaaaacacgctgttagagttcgtg 360
Query: 2193 gatgaaacgataggaacgaatgtgccgaagcagttcgtgcccggtgtcgagagaggcttc 2252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatgaaacgataggaacgaatgtgccgaagcagttcgtgcccggtgtcgagagaggcttc 420
Query: 2253 atagacacgtgtcagaagggatatctgtcgggtcacaagatatcaggcgtcaagttcagg 2312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atagacacgtgtcagaagggatatctgtcgggtcacaagatatcaggcgtcaagttcagg 480
Query: 2313 ctacaagatggcgctcatcacatagtcgattccagtgaactggcattcttcttggctgcg 2372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctacaagatggcgctcatcacatagtcgattccagtgaactggcattcttcttggctgcg 540
Query: 2373 aaaggcgcagttaaggaagttttcgaggacggtgcttggcagatcttggaacccataatg 2432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaggcgcagttaaggaagttttcgaggacggtgcttggcagatcttggaacccataatg 600
Query: 2433 tcagtggaggcggtgatgccggacgagttccacggagttgtaataggacagttgaataag 2492
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 601 tcagtggaggcggtgatgccggacgagttccacggagctgtgataggacagttgaataag 660
Query: 2493 agaggcggcatcgtgaccggtacagagggcagcgagggttggaccacgatatacgctgaa 2552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agaggcggcatcgtgaccggtacagagggcagcgagggttggaccacgatatacgctgnn 720
Query: 2553 gtgcccttgaacaacatgttcgggtacgctggggaa 2588
|||||||||||||||||||||||||||||||||||
Sbjct: 721 ntgcccttgaacaacatgttcgggtacgctggggaa 756
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 381,373
Number of extensions: 8410
Number of successful extensions: 8410
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8410
Number of HSP's successfully gapped: 1
Length of query: 3235
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3217
Effective length of database: 8,109,745
Effective search space: 26089049665
Effective search space used: 26089049665
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)