BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08414 (UTR included)
(2392 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1C08 1501 0.0
>BF01023B1C08
Length = 793
Score = 1501 bits (757), Expect = 0.0
Identities = 778/785 (99%)
Strand = Plus / Plus
Query: 858 tatatttcacatttcactatgactgttcgttggggtatcgtaactgctggcaaaattagc 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tatatttcacatttcactatgactgttcgttggggtatcgtaactgctggcaaaattagc 68
Query: 918 catgactttgtcaatgctgttaactcatatcctgaaaaaggagaccaagtcattgcggct 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 catgactttgtcaatgctgttaactcatatcctgaaaaaggagaccaagtcattgcggct 128
Query: 978 gtggccgctcgtgatcctacccgagcaaaagaatttgccaaaactcataacattcctaaa 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gtggccgctcgtgatcctacccgagcaaaagaatttgccaaaactcataacattcctaaa 188
Query: 1038 gtttttaatacgtacgaggatatggcaataagcaatgatattgatgtggcttacattgga 1097
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gttttcaatacgtacgaggatatggcaataagcaatgatattgatgtggcttacattgga 248
Query: 1098 gcactcaatcacgaccactacgcactatcgaaattattccttgaatctggcaaacatgtg 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gcactcaatcacgaccactacgcactatcgaaattattccttgaatctggcaaacatgtg 308
Query: 1158 ttatgtgaaaagccgttttgtctaaatgccaaacaagtggaaagcttggtgaaaattgct 1217
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 309 ttatgtgaaaagccgttttgtctaaatgccaaacaagtggaaagcttggtaaaaattgct 368
Query: 1218 aaaaaccaaaaccttttcttaatggaggccctatggtctcgttttgcaccattttacgtt 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaaaccaaaaccttttcttaatggaggccctatggtctcgttttgcaccattttacgtt 428
Query: 1278 aatttggaagaacaactagaatcaggaattatcggtcgacctcaatttgtagaagtaaat 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aatttggaagaacaactagaatcaggaattatcggtcgacctcaatttgtagaagtaaat 488
Query: 1338 tttggattgccgattgagaacgtggagaggctaagaaaaagggatatgggaggcggcgcg 1397
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 489 tttggattgccgattgagaacgtggagaggctaagaaaaaaggatctgggaggcggcgcg 548
Query: 1398 ctgatggacattggtatttatacagtacattttgcacaactggtgttcaaagaggatcct 1457
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 549 ctgatggacattggtatttatacagtacattttgcacaactggtgtttaaagaggatcct 608
Query: 1458 atcaagataacagcagttggtgaattaaatgatgatggggtggattgtgtggaaaccgtt 1517
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 609 atcaagataacagcagttggtgaattaaatgatgatggggtggatagtgtggaaaccgtt 668
Query: 1518 atcttggaatattctgaaggaagacgggctgttttaaacaatcacgccaaagtaaaactc 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 atcttggaatattctgaaggaagacgggctgttttaaacaatcacgccaaagtaaaactc 728
Query: 1578 tggaacaaagctactgttgtaggcgactacggaaaaagaataacatttgaggatcctttc 1637
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 729 tggaacaaagctactgttgtaggcgactacggaaaaagaataacattcgaggatcctttc 788
Query: 1638 aacat 1642
|||||
Sbjct: 789 aacat 793
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,867
Number of extensions: 5720
Number of successful extensions: 5720
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5720
Number of HSP's successfully gapped: 1
Length of query: 2392
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2375
Effective length of database: 8,119,229
Effective search space: 19283168875
Effective search space used: 19283168875
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)