BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08418 (UTR included)
(2104 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_337_C1 2163 0.0
>BF14_337_C1
Length = 1174
Score = 2163 bits (1091), Expect = 0.0
Identities = 1094/1095 (99%)
Strand = Plus / Plus
Query: 618 gcccaaaggatcacaactattcaactggacggagtgcagtattttatatcaagaatgaac 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gcccaaaggatcacaactattcaactggacggagtgcagtattttatatcaagaatgaac 139
Query: 678 ccctacagccccgaactaaattatttcctcgcttatcagtattgcaggtctctgggactg 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ccctacagccccgaactaaattatttcctcgcttatcagtattgcaggtctctgggactg 199
Query: 738 cagctagcatcattcgaaaccaaggaaaaggcagattcaattactacatatctaacaaac 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cagctagcatcattcgaaaccaaggaaaaggcagattcaattactacatatctaacaaac 259
Query: 798 gcaggctacaacaagtatgatttctggacgtccggcaacaacctcggcactgacatgtac 857
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 260 gcaggctacaacaagtatgatttctggacgtccggtaacaacctcggcactgacatgtac 319
Query: 858 ttgtggatgagcaccggtctgccattcaacgcgacatttaactacatgagaagagtaaca 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttgtggatgagcaccggtctgccattcaacgcgacatttaactacatgagaagagtaaca 379
Query: 918 atggatcaacccaaccaccacgatgacgatagcatggacccattagatatgccccaggga 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atggatcaacccaaccaccacgatgacgatagcatggacccattagatatgccccaggga 439
Query: 978 agcacagcccctcaacgcaccgccagacatgggactgagcatgtgatgacaaacggctgc 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agcacagcccctcaacgcaccgccagacatgggactgagcatgtgatgacaaacggctgc 499
Query: 1038 gtatctctcaaggcgccatccttccattgggagccgcagcactgcggagagatcaaggac 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtatctctcaaggcgccatccttccattgggagccgcagcactgcggagagatcaaggac 559
Query: 1098 tttatctgcgagcagacacgttgctactattacaactacggctccatcccagtctcctcg 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttatctgcgagcagacacgttgctactattacaactacggctccatcccagtctcctcg 619
Query: 1158 gcgcaggggaaaccgctgtcgatgacgacaacgacgacggcccacccgctaacctcgtcg 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcgcaggggaaaccgctgtcgatgacgacaacgacgacggcccacccgctaacctcgtcg 679
Query: 1218 tcgccgccaccgccacgctccgaacacctcccgacacatttcactcttaacgacctcatc 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcgccgccaccgccacgctccgaacacctcccgacacatttcactcttaacgacctcatc 739
Query: 1278 ggcaagctgcgaccatcatccctcgacggcctccagtcacctcacctcaagaccggagca 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggcaagctgcgaccatcatccctcgacggcctccagtcacctcacctcaagaccggagca 799
Query: 1338 ctattaaaatccccacctcagatcgactcgcattactcgcgggcttccgatgcccactcg 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctattaaaatccccacctcagatcgactcgcattactcgcgggcttccgatgcccactcg 859
Query: 1398 aaggaggtaaaagagcccgaacagaaagaggacacaactcaaggtccttacgaggccgac 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 aaggaggtaaaagagcccgaacagaaagaggacacaactcaaggtccttacgaggccgac 919
Query: 1458 gagggaatggcgggcgatgatcccgctgcgtatctcacccacgaggcccgggagctatcc 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 gagggaatggcgggcgatgatcccgctgcgtatctcacccacgaggcccgggagctatcc 979
Query: 1518 atcgaggacgctccctccaccgtcgagccggacgccacagagcactccgtccacgccagc 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 atcgaggacgctccctccaccgtcgagccggacgccacagagcactccgtccacgccagc 1039
Query: 1578 ggcatgttggcaccccccgcctattagcgtccgactcgcggcccacatatatgataagct 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 ggcatgttggcaccccccgcctattagcgtccgactcgcggcccacatatatgataagct 1099
Query: 1638 tcgtttagatttatcaactaccaaaagtattattcaaatgttgtatgtaaaacattaagg 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 tcgtttagatttatcaactaccaaaagtattattcaaatgttgtatgtaaaacattaagg 1159
Query: 1698 ctaagtgcttgcttt 1712
|||||||||||||||
Sbjct: 1160 ctaagtgcttgcttt 1174
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 203,977
Number of extensions: 3654
Number of successful extensions: 3654
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3652
Number of HSP's successfully gapped: 1
Length of query: 2104
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2087
Effective length of database: 8,119,229
Effective search space: 16944830923
Effective search space used: 16944830923
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)