BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08440 (UTR included)
(2158 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A1H11 549 e-156
>BF01030A1H11
Length = 623
Score = 549 bits (277), Expect = e-156
Identities = 283/285 (99%)
Strand = Plus / Minus
Query: 1521 aggtctataggccactttgccacaaatgtctgtgcaattgtaggtggagtgttcactgtt 1580
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 285 aggtctataggccactttgccacaaatgtctgtgcgattgtaggtggagtgttcactgtt 226
Query: 1581 gctggaatttttgataccctactgtatcattcacttaatgcatttcaaaacaaagttgtc 1640
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 225 gctggaatttttgataccctactgtatcattcactaaatgcatttcaaaacaaagttgtc 166
Query: 1641 cttggtaaagccggttaacttttcaattacaatgtttttaaaaatgtgttataaacatct 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cttggtaaagccggttaacttttcaattacaatgtttttaaaaatgtgttataaacatct 106
Query: 1701 atcgtacattttgcatagtccttgcaaaattctaaatctgtgcccttaaacaatgccagt 1760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 atcgtacattttgcatagtccttgcaaaattctaaatctgtgcccttaaacaatgccagt 46
Query: 1761 atgggaacataattttctttggtaggatcatattgagctcttcct 1805
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 atgggaacataattttctttggtaggatcatattgagctcttcct 1
Score = 408 bits (206), Expect = e-113
Identities = 206/206 (100%)
Strand = Plus / Minus
Query: 1319 aggtgctgttatgtttcagtattatttaaaaatagttccaacaatgtatgtaaaactgga 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggtgctgttatgtttcagtattatttaaaaatagttccaacaatgtatgtaaaactgga 502
Query: 1379 tggtaccattttacatactaatcagttttcagtgacaagacatcagaagtcagtatccaa 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggtaccattttacatactaatcagttttcagtgacaagacatcagaagtcagtatccaa 442
Query: 1439 tataaatgttgaatccggaatgccgggtgcattctttagttatgaattgtcaccactcat 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tataaatgttgaatccggaatgccgggtgcattctttagttatgaattgtcaccactcat 382
Query: 1499 ggttaaatatacagcaaaaggaaggt 1524
||||||||||||||||||||||||||
Sbjct: 381 ggttaaatatacagcaaaaggaaggt 356
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,065
Number of extensions: 19571
Number of successful extensions: 19571
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19571
Number of HSP's successfully gapped: 2
Length of query: 2158
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2141
Effective length of database: 8,119,229
Effective search space: 17383269289
Effective search space used: 17383269289
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)