BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08459 (UTR included)
(3076 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B1F08 583 e-166
>BF01054B1F08
Length = 395
Score = 583 bits (294), Expect = e-166
Identities = 297/298 (99%)
Strand = Plus / Plus
Query: 2779 gaaaaagttggtaacatttgaatttagaacgtttatggaaaatatctacctacttattat 2838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 gaaaaagttggtaacatttgaatttagaacgtttatggaaaatatctacctacttattat 112
Query: 2839 acacagagaatgtcatgttcctcacttgtcaatgacaatacattaatattaaattaaaaa 2898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 acacagagaatgtcatgttcctcacttgtcaatgacaatacattaatattaaattaaaaa 172
Query: 2899 gatcaaggtccatggttcaaaatcagattgctttaactacaaaaagattgattatttaat 2958
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gattaaggtccatggttcaaaatcagattgctttaactacaaaaagattgattatttaat 232
Query: 2959 gcaaacgcagacacttgcaagctttgggcgatagtgatactatgtcatgcatacctagcg 3018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gcaaacgcagacacttgcaagctttgggcgatagtgatactatgtcatgcatacctagcg 292
Query: 3019 gtagtatcataaagtattattatattaatatatttgtgataatattagttataagaat 3076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gtagtatcataaagtattattatattaatatatttgtgataatattagttataagaat 350
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 420,987
Number of extensions: 15285
Number of successful extensions: 15285
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15285
Number of HSP's successfully gapped: 1
Length of query: 3076
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3058
Effective length of database: 8,109,745
Effective search space: 24799600210
Effective search space used: 24799600210
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)