BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08507 (UTR included)
(1789 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015B1E11 1275 0.0
>BF01015B1E11
Length = 675
Score = 1275 bits (643), Expect = 0.0
Identities = 667/675 (98%)
Strand = Plus / Plus
Query: 353 tgattaaaattccttggttttgaatttttactacatacaaatgcaccattgaagtgaaaa 412
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 tgattaaaattccttagttttgaatttttactacttacaaatgcaccattgaagtgaaaa 60
Query: 413 atattaattttatttccctgcataataaaacaggtgaaatacggtgactactctaatctt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 atattaattttatttccctgcataataaaacaggtgaaatacggtgactactctactctt 120
Query: 473 aaaggattgtgacaagtttggagttaaaatgtccggctatccaaatcctaatgactactc 532
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaggattgtgacaaatttggagttaaaatgtccggctatccaaatcctaatgactactc 180
Query: 533 ctggcaacctcaaaacaatactcctaactattcattcaatacgtcgaattcatttggtga 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggcaacctcaaaacaatactcctaactattcattcaatacgtcgaattcatttggtga 240
Query: 593 ttcacaaactttagattttcagaatttcactgctgaccagcaaaattactcttatgatca 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcacaaactttagattttcagaatttcactgctgaccagcaaaattactcttatgatca 300
Query: 653 aggacagagtattcctgctaacaacaatcagtactataatcctaatttattcacacctgc 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggacagagtattcctgctaacaacaatcagtactataatcctaatttattcacacctgc 360
Query: 713 acctatacctggggaatcaaccacagaaacttcagaatttgatgaacccccacttctcga 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acctatacctggggaatcaaccacagaaacttcagaatttgatgaacccccacttctcga 420
Query: 773 tgagttggagatttacccagacagaatactagaaaaaactttagcagttctaaatccttt 832
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 421 tgagttggagatttacccagacagaatactagaaaaaactttagcagtcctaaatccttt 480
Query: 833 ccatggacaatccaaagcagatgatgcaaatttcttacttaaagacacagacattgctgg 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccatggacaatccaaagcagatgatgcaaatttcttacttaaagacacagacattgctgg 540
Query: 893 accaatagcgttttgtttagcattagctgtgtgtctatttctttccgggaacaaagcaca 952
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 541 accaatagcgttttgtttagcattagcagtgtgtctatttctttccgggaacaaagcaca 600
Query: 953 ttttggatatgtgtatggcttatctctaatgtctgtttttctgatgtactttttactatc 1012
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 601 ttttggatatgtgtatggcttatctctaatgtctgtttttctgatgtactttctactatc 660
Query: 1013 actaatgagtcgcac 1027
|||||||||||||||
Sbjct: 661 actaatgagtcgcac 675
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 278,815
Number of extensions: 6342
Number of successful extensions: 6342
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6342
Number of HSP's successfully gapped: 1
Length of query: 1789
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1772
Effective length of database: 8,119,229
Effective search space: 14387273788
Effective search space used: 14387273788
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)