BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08508 (UTR included)
(2264 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B2F03 240 8e-63
BF01029A1A09 147 9e-35
>BF01055B2F03
Length = 776
Score = 240 bits (121), Expect = 8e-63
Identities = 179/197 (90%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 2050 agactacatgattgccccgatgttaggatagcaatgccattccatagctcgtgtggtatc 2109
||||||| |||||||||||| || || ||||| ||||||||||||||| ||||||| ||
Sbjct: 561 agactacttgattgccccgacgtaagcatagccatgccattccatagcgtgtgtggtgtc 620
Query: 2110 aggaaacttctggttcacacggcttggtgttggttccgcggagtcagcggcgtcacttgt 2169
|||| || ||||||||| |||| |||||||||||||||||||||||||||||||| ||
Sbjct: 621 aggagtctcctggttcacgcggcgcggtgttggttccgcggagtcagcggcgtcactcgt 680
Query: 2170 tatatgatattttatccatacaacgatgttaccccggcgatgttcatttattttataata 2229
||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 681 tatatgatattctatccatacagcgatgtt-ccccggcgatgttcatttattttataata 739
Query: 2230 tgtagcgcgtacgtaac 2246
|||||||||||||||||
Sbjct: 740 tgtagcgcgtacgtaac 756
>BF01029A1A09
Length = 732
Score = 147 bits (74), Expect = 9e-35
Identities = 86/89 (96%), Gaps = 2/89 (2%)
Strand = Plus / Minus
Query: 1973 ttccaggaaaactacgaaacatacttatatgtatattataata--aaaattacatattaa 2030
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 89 ttccaggaaaactacgaaacatacttatatgtatattataataaaaaaattacatattaa 30
Query: 2031 aacgtataacctatacctaagactacatg 2059
||| |||||||||||||||||||||||||
Sbjct: 29 aacttataacctatacctaagactacatg 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,719
Number of extensions: 4645
Number of successful extensions: 4645
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4643
Number of HSP's successfully gapped: 2
Length of query: 2264
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2247
Effective length of database: 8,119,229
Effective search space: 18243907563
Effective search space used: 18243907563
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)