BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08529 (UTR included)
(1531 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A2C05 1382 0.0
>BF01017A2C05
Length = 718
Score = 1382 bits (697), Expect = 0.0
Identities = 712/718 (99%)
Strand = Plus / Plus
Query: 409 tccaataaaatttgagctttttaaaattaacaggaagtcgtcttcatataacagacaacg 468
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tccaataaaatttgagctttttaaaattaannngaagtcgtcttcatataacagacaacg 60
Query: 469 ggcgagaacttatttcgatttcttgtaatattatggctcaaaatatcaaccctcactacg 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcgagaacttatttcgatttcttgtaatattatggctcaaaatatcaaccctcactacg 120
Query: 529 catcgtcatctaatcccgccaaacagagcgaggatacgataaaattgaaagacaatcatg 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catcgtcatctaatcccgccaaacagagcgaggatacgataaaattgaaagacaatcatg 180
Query: 589 cagttagcaaacgattgcagaaggaactaatggagctgatgcgatgcgctgacaagggaa 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagttagcaaacgattgcagaaggaactaatggagctgatgcgatgcgctgacaagggaa 240
Query: 649 tatccgctttcccagagagcgagaaccttttcaaatggataggaacaattaacggtcctc 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatccgctttcccagagagcgagaaccttttcaaatggataggaacaattaacggtcctc 300
Query: 709 aagacacggtttattctggtcacaaatacaaactatccctcgaattccccaattcatatc 768
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggacacggtttattctggtcacaaatacaaactatccctcgaattccccaattcatatc 360
Query: 769 cctatgccccgcctgtagttaaattcctgacaccctgttttcatccgaacgtggatacgt 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctatgccccgcctgtagttaaattcctgacaccctgttttcatccgaacgtggatacgt 420
Query: 829 gtggattaatatgtctagatatcttaaaagacaagtggacggctctctacgacgttcgca 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtggattaatatgtctagatatcttaaaagacaagtggacggctctctacgacgttcgca 480
Query: 889 cggtgctgctgtctatccagagtttgctggcggagccgaacactcaaagccctctcaacc 948
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 481 cggtgctgctgtctatccagagtttgctggcggaaccgaacactcaaagccctctcaacc 540
Query: 949 agcaggcctcgtacctgtggcctaaccagcccgcctataaaaaatatttagaagaatttt 1008
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 541 agcaggcctcgtacctgtggcctaaccagcccgcctataagaaatatttagaagaatttt 600
Query: 1009 ataataaacataaagattcatagtctgattgttagtcatgtttatattgtgtttatgtgt 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ataataaacataaagattcatagtctgattgttagtcatgtttatattgtgtttatgtgt 660
Query: 1069 tatattattttgtgaatgcccgagtgattgaccggtgaaagtagacagtctctgtatt 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatattattttgtgaatgcccgagtgattgaccggtgaaagtagacagtctctgtatt 718
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 275,729
Number of extensions: 6827
Number of successful extensions: 6827
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6827
Number of HSP's successfully gapped: 1
Length of query: 1531
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1514
Effective length of database: 8,119,229
Effective search space: 12292512706
Effective search space used: 12292512706
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)