BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08532 (UTR included)
(2002 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011A1E05 1025 0.0
>BF01011A1E05
Length = 663
Score = 1025 bits (517), Expect = 0.0
Identities = 638/675 (94%), Gaps = 25/675 (3%)
Strand = Plus / Plus
Query: 1269 gtggatttgaacgatatcttcaaagacttagccaatatggtccacgaacaaggcactata 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggatttgaacgatatcttcaaagacttagccaatatggtccacgaacaaggcactata 60
Query: 1329 ttggacagaatagactataatatcgaacaaacccaggttcaagtgcacgaaggttacaag 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggacagaatagactataatatcgaacaaacccaggttcaagtgcacgaaggttacaag 120
Query: 1389 caattgcagaaagctgagagataccaacgaaagaataggaaaatgcagtgtatactctgc 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caattgcagaaagctgagagataccaacgaaagaataggaaaatgcagtgtatactctgc 180
Query: 1449 ctgtcctctgttctcataggtctagtcatactgttgatcatcgttaagagttagcttaaa 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 ctgtcctctgttctcataggtctagtcatactgttgatcatcgttaagagttagcttcaa 240
Query: 1509 ctgaatttagtaaagaaatatatgaattaaagttttgtattttatacctaagatacatat 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgaatttagtaaagaaatatatgaattaaagttttgtattttatacctaagatacatat 300
Query: 1569 aacagtttactcatatgtacactgaaacatatttattgaaaaaaaaaaaacattaataaa 1628
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 301 aacagtttactcatatgtacactgaaacatatttattg-aaaaaaaaaaacattaa---- 355
Query: 1629 ttattaagcgaatgacacgattttcatgtgtaataatataattcatggcggcattttaat 1688
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 356 --attaagcgaatgacacgattttcatgtg---taatataatttatggcggcattttaat 410
Query: 1689 aaattatgacaactaagtgataaatacattcgcattgtaaaattgtgtttttacattgac 1748
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 411 aaattatgacaactaagtgataaatacattcgcattgtaaaatcgtgtttttacattgac 470
Query: 1749 acttaacaaaatggcgatttatgttttgttgacttgaaacacgaaacacgttaaaattaa 1808
|||||||||||||||||||||| || ||||||||||||| ||||| |||| |||||||||
Sbjct: 471 acttaacaaaatggcgatttatattctgttgacttgaaaaacgaatcacgataaaattaa 530
Query: 1809 gtcgcagat----------caagatattgtttaatttaaaaaaaaacttgtcgcttattt 1858
||| ||||| ||||||||||||| |||| ||||||||||||||||| |||
Sbjct: 531 gtctcagatcaaagtcgaccaagatattgttttattt--aaaaaaacttgtcgctttttt 588
Query: 1859 -aattccgttcgaaacgtacaggtagtattgtgtgaggactggtgcattg--tttattat 1915
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 589 aaattccgttcgaaacgtacaggtagtattgtgggaggactggtgcattgtctttattat 648
Query: 1916 tccgttgaagatcta 1930
|||||||||||||||
Sbjct: 649 tccgttgaagatcta 663
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 315,600
Number of extensions: 19558
Number of successful extensions: 19558
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19554
Number of HSP's successfully gapped: 3
Length of query: 2002
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1985
Effective length of database: 8,119,229
Effective search space: 16116669565
Effective search space used: 16116669565
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)