BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08551 (UTR included)
(1369 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B1C02 1497 0.0
BF01041A2C10 1072 0.0
BF01017A1D08 521 e-148
>BF01040B1C02
Length = 839
Score = 1497 bits (755), Expect = 0.0
Identities = 768/771 (99%), Gaps = 1/771 (0%)
Strand = Plus / Plus
Query: 192 ggtcggggcatcgtgtgcgagtgctcggggccgagcgcctgccccgacggctcctccaac 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ggtcggggcatcgtgtgcgagtgctcggggccgagcgcctgccccgacggctcctccaac 128
Query: 252 ggcacgtgttccacacagcccggggggtactgcttcgtcacggtcgaggaggtgctggac 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ggcacgtgttccacacagcccggggggtactgcttcgtcacggtcgaggaggtgctggac 188
Query: 312 gacggcggcctggtcgtcctggagagaatcgctggctgtctacctcctgatgagtcagga 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gacggcggcctggtcgtcctggagagaatcgctggctgtctacctcctgatgagtcagga 248
Query: 372 ttcatgcagtgtaaaagttcccaagtgccacaccaacaccccaaagtgatagaatgttgt 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttcatgcagtgtaaaagttcccaagtgccacaccaacaccccaaagtgatagaatgttgt 308
Query: 432 gagaaggacctctgtaaccgtcgcctccgccctgtgttgcccggtgggtcggagggctct 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gagaaggacctctgtaaccgtcgcctccgccctgtgttgcccggtgggtcggagggctct 368
Query: 492 ccgcccgcccttcccgcgccgccatccagccccgccccgccggcgctcgtggccgccgcc 551
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 369 ccgcccgcccttcccgcgccgccatccagccccgccccgccggcgcttgtggccgccgcc 428
Query: 552 ctgtgcgtggctctcctagccgccttggcagccttgtgggtgctgctgcggaggaggcgc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctgtgcgtggctctcctagccgccttggcagccttgtgggtgctgctgcggaggaggcgc 488
Query: 612 tccggcaagaggccgccctcgccgcccgtcatcgccgatcatcccgagatctcgtccggc 671
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 489 tccggcaagaggccgccctcgccacccgtcatcgccgatcatcccgagatctcgtccggc 548
Query: 672 tcgggctccggcctgccgctcctcgtgcagcggacggtcgccaagcagatacagatggtg 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tcgggctccggcctgccgctcctcgtgcagcggacggtcgccaagcagatacagatggtg 608
Query: 732 gagtccatagggaagggacgctacggagaggtgtggctcgcgcgctggc-gggggagaag 790
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 609 gagtccatagggaagggacgctacggagaggtgtggctcgcgcgctggcggggggagaag 668
Query: 791 gtcgccgtcaaggttttcttcaccaccgaggaggctagctggttccgggagacggagatc 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gtcgccgtcaaggttttcttcaccaccgaggaggctagctggttccgggagacggagatc 728
Query: 851 taccagacggtgctcatgaggcacgagaacatcctcggcttcatcgccgccgacatcaag 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 taccagacggtgctcatgaggcacgagaacatcctcggcttcatcgccgccgacatcaag 788
Query: 911 ggcaccggctcctggacgcagatgctgctcatcaccgactaccacgagcac 961
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ggcaccggctcctggacgcagatgctgctcatcaccgactaccacgagcac 839
>BF01041A2C10
Length = 764
Score = 1072 bits (541), Expect = 0.0
Identities = 556/561 (99%)
Strand = Plus / Plus
Query: 193 gtcggggcatcgtgtgcgagtgctcggggccgagcgcctgccccgacggctcctccaacg 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gtcggggcatcgtgtgcgagtgctcggggccgagcgcctgccccgacggctcctccaacg 263
Query: 253 gcacgtgttccacacagcccggggggtactgcttcgtcacggtcgaggaggtgctggacg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcacgtgttccacacagcccggggggtactgcttcgtcacggtcgaggaggtgctggacg 323
Query: 313 acggcggcctggtcgtcctggagagaatcgctggctgtctacctcctgatgagtcaggat 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acggcggcctggtcgtcctggagagaatcgctggctgtctacctcctgatgagtcaggat 383
Query: 373 tcatgcagtgtaaaagttcccaagtgccacaccaacaccccaaagtgatagaatgttgtg 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcatgcagtgtaaaagttcccaagtgccacaccaacaccccaaagtgatagaatgttgtg 443
Query: 433 agaaggacctctgtaaccgtcgcctccgccctgtgttgcccggtgggtcggagggctctc 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agaaggacctctgtaaccgtcgcctccgccctgtgttgcccggtgggtcggagggctctc 503
Query: 493 cgcccgcccttcccgcgccgccatccagccccgccccgccggcgctcgtggccgccgccc 552
|||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 504 cgcccgccctccctgcgccgccctccagccccgccccgccggcgctcgtggccgccgccc 563
Query: 553 tgtgcgtggctctcctagccgccttggcagccttgtgggtgctgctgcggaggaggcgct 612
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtgcgtggctctcctagccgccctggcagccttgtgggtgctgctgcggaggaggcgct 623
Query: 613 ccggcaagaggccgccctcgccgcccgtcatcgccgatcatcccgagatctcgtccggct 672
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccggaaagaggccgccctcgccgcccgtcatcgccgatcatcccgagatctcgtccggct 683
Query: 673 cgggctccggcctgccgctcctcgtgcagcggacggtcgccaagcagatacagatggtgg 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cgggctccggcctgccgctcctcgtgcagcggacggtcgccaagcagatacagatggtgg 743
Query: 733 agtccatagggaagggacgct 753
|||||||||||||||||||||
Sbjct: 744 agtccatagggaagggacgct 764
>BF01017A1D08
Length = 697
Score = 521 bits (263), Expect = e-148
Identities = 269/271 (99%)
Strand = Plus / Plus
Query: 1099 ccgtgacatcaagagcaagaacatcctggtcaagagagacggccagtgcgccctcgcgga 1158
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ccgtgatatcaagagcaagaacatcctggtcaagagagacggccagtgcgccctcgcgga 69
Query: 1159 cttcggcctcgcagtgcgctacgtggccgagagagacgaggtggacctcgcgcccaacac 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 cttcggcctcgcagtgcgctacgtggccgagagagacgaggtggacctcgcgcccaacac 129
Query: 1219 cagggtcggcacgcggcggtacatggcgcccgaggtcatcgacgagaagctcgacctctc 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cagggtcggcacgcggcggtacatggcgcccgaggtcatcgacgagaagctcgacctctc 189
Query: 1279 ggacttcgaggccttcaagatggccgacatgtactcgctggggctcgtgctatgggagat 1338
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 190 ggacttcgaggccttcaagatggccgacatgtactcgctggggctcgtgctgtgggagat 249
Query: 1339 gtgccggcgctgcgcggcgggcgcgggcgca 1369
|||||||||||||||||||||||||||||||
Sbjct: 250 gtgccggcgctgcgcggcgggcgcgggcgca 280
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 114,244
Number of extensions: 2441
Number of successful extensions: 2441
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2440
Number of HSP's successfully gapped: 3
Length of query: 1369
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1352
Effective length of database: 8,119,229
Effective search space: 10977197608
Effective search space used: 10977197608
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)