BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08566 (UTR included)
(1984 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057A1B05 98 7e-20
BF01054B2B08 90 2e-17
BF14_335_C2 80 2e-14
BF01031B2E06 76 2e-13
BF01051A2D06 74 9e-13
BF14_736_C1 72 4e-12
>BF01057A1B05
Length = 732
Score = 97.6 bits (49), Expect = 7e-20
Identities = 82/93 (88%)
Strand = Plus / Minus
Query: 1853 gtttataatatttcctacaacatacgtaaaaatcagacctcagactataagtaaagtgag 1912
||||| ||||||||| |||||| ||||| ||||||| ||||||| ||||| |||||||
Sbjct: 134 gtttacaatatttccctcaacatgcgtaataatcagagttcagactctaagtgaagtgag 75
Query: 1913 tacaatttttacttacctgtagcacctggtacc 1945
||||||||||||||||| ||||| |||||||||
Sbjct: 74 tacaatttttacttacccgtagcgcctggtacc 42
>BF01054B2B08
Length = 807
Score = 89.7 bits (45), Expect = 2e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 571 atgcgttgccaaccttggttgttgacaaagagggaggggtggaaataaggagatggcagg 630
||||||||||||||||||||||| | ||| ||||||||||| ||||| |||||||||||
Sbjct: 802 atgcgttgccaaccttggttgtttaggaagtgggaggggtgggaataaagagatggcagg 743
Query: 631 aaagggtgg 639
|||||||||
Sbjct: 742 aaagggtgg 734
>BF14_335_C2
Length = 1827
Score = 79.8 bits (40), Expect = 2e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 1114 gagcttacggttccttggga-accaacatccccaaagaccataccatcaagatcaacaaa 1172
|||| ||||||||||||| | ||||||||||||||| ||||| |||||||| |||||||
Sbjct: 1233 gagcctacggttccttggaagaccaacatccccaaaaaccatgccatcaaggtcaacaag 1174
Query: 1173 tattacgagctcacta 1188
||||| ||||||||||
Sbjct: 1173 tattatgagctcacta 1158
>BF01031B2E06
Length = 707
Score = 75.8 bits (38), Expect = 2e-13
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 1133 aaccaacatccccaaagaccataccatcaagatcaacaaatattacg-agctcactaa 1189
|||||||||||||||||||||| ||||||||||||| || ||||||| ||||||||||
Sbjct: 438 aaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
>BF01051A2D06
Length = 681
Score = 73.8 bits (37), Expect = 9e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 1247 agagagaggaaacggctgggtgtcgacattgcgacaaccaaccagaggacacggtggagc 1306
|||| ||||||||| | |||||||||||||||||| | || || |||||||| |||||||
Sbjct: 420 agagggaggaaacgcccgggtgtcgacattgcgacgatcacccggaggacacagtggagc 479
Query: 1307 atacggtgg 1315
|||||||||
Sbjct: 480 atacggtgg 488
>BF14_736_C1
Length = 796
Score = 71.9 bits (36), Expect = 4e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 583 ccttggttgttgacaaagagggaggggtggaaataaggagatggcaggaaagggtg 638
||||| ||||||| ||| |||||||||||| |||||||| ||||||||||||||||
Sbjct: 796 ccttgattgttgagaaaaagggaggggtgggaataaggaaatggcaggaaagggtg 741
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 237,390
Number of extensions: 4768
Number of successful extensions: 4768
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 4767
Number of HSP's successfully gapped: 6
Length of query: 1984
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1967
Effective length of database: 8,119,229
Effective search space: 15970523443
Effective search space used: 15970523443
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)