BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN08583 (UTR included)
(3001 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1B11 1526 0.0
>BF01023B1B11
Length = 806
Score = 1526 bits (770), Expect = 0.0
Identities = 797/806 (98%)
Strand = Plus / Plus
Query: 1479 ggggacttcgccctcgaggccggggctcttgtgctcgctgacaaaggagtgtgctgtgtg 1538
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggggactttgccctcgaggccggggctcttgtgctcgctgacaaaggagtgtgctgtgtg 60
Query: 1539 gatgaactggataaaatgagcgcccatcacagtagtttgttggaggccatggaacagcga 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgaactggataaaatgagcgcccatcacagtagtttgttggaggccatggaacagcga 120
Query: 1599 cgtgtgagtgtcgctaaaggtggagttgtttgcagtctaccagctcgagccacggtactc 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtgtgagtgtcgctaaaggtggagttgtttgcagtctaccagctcgagccacggtactc 180
Query: 1659 gccgctgctaacccagcagccggatcgtacaatcgatctaaaacggtgtctgagaattta 1718
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 gccgctgctaacccagcagccggatcgtacaatcgatctaaaacggtgtccgagaattta 240
Query: 1719 aaactaaattcagctttactatcaagattcgatctggtttttatattgctggaccaacct 1778
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 241 aaactaaattcagctttactatcaagattcgatctagtttttatattgctggaccaacct 300
Query: 1779 gatgagaaaatcgacgctatgctctccgaacacgtgttggctcttcattcacgttctaaa 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgagaaaatcgacgctatgctctccgaacacgtgttggctcttcattcacgttctaaa 360
Query: 1839 agtaaaagaaaacaagatggagtaagccaactcaatgctgtaaattcaagtcaaccagac 1898
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtaaaagaaaacaagacggagtaagccaactcaatgctgtaaattcaagtcaaccagac 420
Query: 1899 accgacgtgcctttgagtcaaagattacgtctcaaatctggagaaataattgacacctta 1958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accgacgtgcctttgagtcaaagattacgtctcaaatctggagaaataattgacacctta 480
Query: 1959 ccactggtactgctccggaaatatatagcgtatgcaaggagatacgtccatccgaaatta 2018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccactggtactgctccggaaatatatagcgtatgcaaggagatacgtccatccgaaatta 540
Query: 2019 agttcggaggcagcgaatattctacaagatttctatttagaactcaggaacaatcaccag 2078
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agttcagaggcagcgaatattctacaagatttctatttagaactcaggaacaatcaccag 600
Query: 2079 agtgtttacaatgacggcgctcccatcaccaccaggcaactcgaggcgtgcataagactg 2138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agtgtttacaatgacggcgctcccatcaccaccaggcaactcgaggcgtgcataagactg 660
Query: 2139 actcaggcacgagctagagtcaatttaagagaggaagcgacagcccgagacgcacttgac 2198
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 661 actcaggcacgagccagagtcaatttaagagaggaagctacagcccgagacgcacttgac 720
Query: 2199 gtaataagcctcgttaaacacagtttaatggacacgttcagtgacgaattcggaaatata 2258
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 721 gtaataagcctcgttaaacacagcttaatggacacattcagtgacgaattcggaaatata 780
Query: 2259 caattatcgcgctcgattaacggatc 2284
||||||||||||||||||||||||||
Sbjct: 781 caattatcgcgctcgattaacggatc 806
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 340,500
Number of extensions: 6696
Number of successful extensions: 6696
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6696
Number of HSP's successfully gapped: 1
Length of query: 3001
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2983
Effective length of database: 8,109,745
Effective search space: 24191369335
Effective search space used: 24191369335
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)